Gene Plav_1749 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1749 
Symbol 
ID5456143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1892570 
End bp1893316 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content68% 
IMG OID640877324 
Producthypothetical protein 
Protein accessionYP_001413025 
Protein GI154252201 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.116456 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCAGG GGCAAAACAA CGCCAAGCGC TCTCGTGGAC GTGGCCGCAA GCCACAGCAG 
CATTCGGCCA ACCGGGCTTA CGACAGCAAC GGTCCCGACG TGAAGGTCCG CGGCACCGCG
GCAACCGTCT GCGAGAAGTA CCAGCAGCTC GCGCGTGATG CGATTTCGGC GGGCGACCGC
GTAACCGCGG AAAACTACTA TCAGCACGCT GAGCACTATT ACCGGCTGCT GATGGCGACC
CAGCAGGGTC AGGAAGGCCA GCAGCGCCAG CAGAGCAGCC TCGGCTACCG GCCGGACGAA
GACGAGGAGA GCGAGAACGA GGGCGATTAC ACGCCTGACG GTCCGCAGCC GCGCCATCGG
GGCCAGCCCT GGCACCAGCA GGAAGGCCAG CAGCGCCACA ACAATAATGG CGGGCAACAT
CCCAACCAGA CTAATGGCGG CCACAATAAT AACGGCAGCC AGAATAATGG CAGCCAGAAT
GCGCCCCGCC ATGACGACCG CTCCGCGCAG TCCTCGGGCG ATGGCGATGA AGCGGCGGAT
CGCGCCGCCT TGCAGGCAAG CGGTCAGGAT GAGGGGCAAC CCTCCGGCCA GCCCGTCCAT
CAGGGTGGCG AGCAAGGTGG CGAACAGGGC GAGGGCCAGC CGCGCCGCCG CCAGAACCGC
CGCCGCCGGC CGCGCAGCGA TGCCGCCGGT GGAGCGGGTG GCGATGCGCC GCGCGCCGAA
GCCGCCCCGG TCGAAAGCGC CGACTAG
 
Protein sequence
MRQGQNNAKR SRGRGRKPQQ HSANRAYDSN GPDVKVRGTA ATVCEKYQQL ARDAISAGDR 
VTAENYYQHA EHYYRLLMAT QQGQEGQQRQ QSSLGYRPDE DEESENEGDY TPDGPQPRHR
GQPWHQQEGQ QRHNNNGGQH PNQTNGGHNN NGSQNNGSQN APRHDDRSAQ SSGDGDEAAD
RAALQASGQD EGQPSGQPVH QGGEQGGEQG EGQPRRRQNR RRRPRSDAAG GAGGDAPRAE
AAPVESAD