| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1742 |
|---|
| Symbol | |
|---|
| ID | 5453734 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | - |
|---|
| Start bp | 1882904 |
|---|
| End bp | 1883665 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640877317 |
|---|
| Product | ubiquinone biosynthesis O-methyltransferase |
|---|
| Protein accession | YP_001413018 |
|---|
| Protein GI | 154252194 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
|---|
| TIGRFAM ID | [TIGR01983] ubiquinone biosynthesis O-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 0.581641 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGATA GAGCAGATAA AGCGGCGCGT TCAAGCGTCG ACCCCGGCGA GATCGCCCGA
TTTTCGGCCA TGGCGGCGGA ATGGTGGGAC CCGGCCGGCA AATTCCGGCC GCTCCATAAA
TTCAACCCGA CGCGGCTTTC CTATATCCGC GAGCGCACCA GCGCGCATTT CGGCCTCGAC
GCGAGGGCGG TGCGGCCTTT CGAGGATTTG CGCTTTCTCG ACATAGGCTG CGGCGGCGGG
CTCCTTTCCG AACCGATGGC GCGGCTCGGC GCCGCCATGG TGAGCGCGGA CGCCTCTGAA
CAGAACATCA AGACGGCTTC CGTCCATGCC GCCGAACAGG GGCTCGGCAT CGACTACCGC
TGCACGACGG CGGAGGCGCT GGCGGCGGCC GGCGAGACAT TCGACGTCAT CCTCAACATG
GAAGTGATCG AGCATGTCGC CGACCCGATG GCCTTTCTGA AGGATTGCGC GAGCATGTTG
CGGCCGGGGG GCCTCATGTT CATCGCCACG CTGAACCGGA CGCTGAAGGC GCATGCCTTC
GCGATTGTCG GCGCCGAATA TGTGCTCGGC TGGCTGCCGC GCGGCACGCA TGACTGGAAG
AAATTCATCA CCGTGAACGA GATGGAGACG GGGATCGCCG ATGCGGGCCT CCGGCTCAAG
GAACTGACGG GGGTGAGCTA CAATCCGCTC ACCGACAAAT GGTCGCTGAG CCGCGACACG
GATGTGAACT ACATGGCGCT TGCGGAGCGG GCGCGGGACT AG
|
|---|
| Protein sequence | MADRADKAAR SSVDPGEIAR FSAMAAEWWD PAGKFRPLHK FNPTRLSYIR ERTSAHFGLD
ARAVRPFEDL RFLDIGCGGG LLSEPMARLG AAMVSADASE QNIKTASVHA AEQGLGIDYR
CTTAEALAAA GETFDVILNM EVIEHVADPM AFLKDCASML RPGGLMFIAT LNRTLKAHAF
AIVGAEYVLG WLPRGTHDWK KFITVNEMET GIADAGLRLK ELTGVSYNPL TDKWSLSRDT
DVNYMALAER ARD
|
|---|
| |