Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_1736 |
Symbol | |
ID | 5455621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 1878748 |
End bp | 1879524 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640877311 |
Product | phosphoribosyltransferase |
Protein accession | YP_001413012 |
Protein GI | 154252188 |
COG category | [R] General function prediction only |
COG ID | [COG1040] Predicted amidophosphoribosyltransferases |
TIGRFAM ID | [TIGR00201] comF family protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGGCTGA GGGCGGGCGT GCAGCGTTGG GCGGAGGCGG CGAAAGCGGG ATTCTCCCGC GTCGCAGATA TTGTGCTGCC GCCGCTCTGC CTCGGTTGCG GGTGCGGCCT CGACAGTCAT GCCGCCCTTT GCGGTACCTG CTGGGCAGGG GTCGATTTCA TCGACCGGCC ATATTGCGAG GTTACAGGCG TCCCCTTTCC TTATGAAGCG GGCCTGGGGG CTGTGAGCGC CGCCGCCATT GCCAATCCTC CCTCCTATGC CCGGGCCCGC GCCGTCATGC GCTACAATGA AGGGAGCACG AGGCTCATCC ACCGCTTCAA ATATAGTGAC CGGATGGAGG CCGCCCCGGC CTTTGCCCTC TGGCTTGTAC GGGCCGGCGC CGCGCTGCTG GCGGAAGCCG ATCTCGTCGT GCCGGTTCCC CTTCACAAGC GCCGTCTTTT TTTCCGCCGC TTCAATCAGT CGGCGGAACT TTCCCGCGCC GTTGCGCGTC TTGCCGGTAT CGGATGCGCG CCGGAGCTTC TTGTCCGGGT GCGGGCGACC CGCCCTCAGG TCGGCCTTTC GGGCGATGCA AGGCGGCGGA ATGTTGCCGG TGCTTTTCGT CTCGCACCGG GCGTGGCGCC TCTCGTCAAG GATCGCCGGA TCGTTCTGAT AGATGATGTC ATGACGACGG GTGCGACCGC CGAGGCTTGC GCCCGCGTTC TTACCGGGGC CGGGGCGCGT GAGGTCTCCG TCCTTTGCCT TGCCCGGGTT GTACCCGCTG GCGGCGCATC TATATGA
|
Protein sequence | MGLRAGVQRW AEAAKAGFSR VADIVLPPLC LGCGCGLDSH AALCGTCWAG VDFIDRPYCE VTGVPFPYEA GLGAVSAAAI ANPPSYARAR AVMRYNEGST RLIHRFKYSD RMEAAPAFAL WLVRAGAALL AEADLVVPVP LHKRRLFFRR FNQSAELSRA VARLAGIGCA PELLVRVRAT RPQVGLSGDA RRRNVAGAFR LAPGVAPLVK DRRIVLIDDV MTTGATAEAC ARVLTGAGAR EVSVLCLARV VPAGGASI
|
| |