Gene Plav_1736 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1736 
Symbol 
ID5455621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1878748 
End bp1879524 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content66% 
IMG OID640877311 
Productphosphoribosyltransferase 
Protein accessionYP_001413012 
Protein GI154252188 
COG category[R] General function prediction only 
COG ID[COG1040] Predicted amidophosphoribosyltransferases 
TIGRFAM ID[TIGR00201] comF family protein 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGCTGA GGGCGGGCGT GCAGCGTTGG GCGGAGGCGG CGAAAGCGGG ATTCTCCCGC 
GTCGCAGATA TTGTGCTGCC GCCGCTCTGC CTCGGTTGCG GGTGCGGCCT CGACAGTCAT
GCCGCCCTTT GCGGTACCTG CTGGGCAGGG GTCGATTTCA TCGACCGGCC ATATTGCGAG
GTTACAGGCG TCCCCTTTCC TTATGAAGCG GGCCTGGGGG CTGTGAGCGC CGCCGCCATT
GCCAATCCTC CCTCCTATGC CCGGGCCCGC GCCGTCATGC GCTACAATGA AGGGAGCACG
AGGCTCATCC ACCGCTTCAA ATATAGTGAC CGGATGGAGG CCGCCCCGGC CTTTGCCCTC
TGGCTTGTAC GGGCCGGCGC CGCGCTGCTG GCGGAAGCCG ATCTCGTCGT GCCGGTTCCC
CTTCACAAGC GCCGTCTTTT TTTCCGCCGC TTCAATCAGT CGGCGGAACT TTCCCGCGCC
GTTGCGCGTC TTGCCGGTAT CGGATGCGCG CCGGAGCTTC TTGTCCGGGT GCGGGCGACC
CGCCCTCAGG TCGGCCTTTC GGGCGATGCA AGGCGGCGGA ATGTTGCCGG TGCTTTTCGT
CTCGCACCGG GCGTGGCGCC TCTCGTCAAG GATCGCCGGA TCGTTCTGAT AGATGATGTC
ATGACGACGG GTGCGACCGC CGAGGCTTGC GCCCGCGTTC TTACCGGGGC CGGGGCGCGT
GAGGTCTCCG TCCTTTGCCT TGCCCGGGTT GTACCCGCTG GCGGCGCATC TATATGA
 
Protein sequence
MGLRAGVQRW AEAAKAGFSR VADIVLPPLC LGCGCGLDSH AALCGTCWAG VDFIDRPYCE 
VTGVPFPYEA GLGAVSAAAI ANPPSYARAR AVMRYNEGST RLIHRFKYSD RMEAAPAFAL
WLVRAGAALL AEADLVVPVP LHKRRLFFRR FNQSAELSRA VARLAGIGCA PELLVRVRAT
RPQVGLSGDA RRRNVAGAFR LAPGVAPLVK DRRIVLIDDV MTTGATAEAC ARVLTGAGAR
EVSVLCLARV VPAGGASI