| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1730 |
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| Symbol | |
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| ID | 5453608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1871726 |
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| End bp | 1874533 |
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| Gene Length | 2808 bp |
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| Protein Length | 935 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640877305 |
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| Product | preprotein translocase, SecA subunit |
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| Protein accession | YP_001413006 |
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| Protein GI | 154252182 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCAGCCG CCGCCAAAGC CCGCTTGATT GACAAGGGAG GGTCGCCCCC TTACATCGAA
GGCGCACCGC AAGAGGAAAT TCACCTGATG GCAAGCTTGG GCGCCTTCGC CAAGCGTCTT
TTCGGCTCCT CCAACGACCG AAGGATCAAG GCTTACAAGG CCAGGGTCGA GGCGATCAAC
GCCCTCGAGC CCGACATGAT CGCGCTCAGC GACGATGCGT TGCGAGGCAA GACCGCCGAG
TTTCGCGCGC GCCTCGCGGA TGGCGCCGTG CTGGACGAAC TTCTGCCGGA GGCCTTCGCC
GTGGTTCGCG AGGCCGCCAA GCGCAGCCTC GGCCAGCGGC ATTATGACGT GCAGCTGATC
GGCGGCATGG TCCTCAACGA CGGCAACATC GCGGAAATGA AGACCGGCGA AGGCAAGACG
CTGGTCTCGA CGCTTGCCGC CTATCTGAAT GCGCTGACCG GCAAGGGCGT TCATGTCGTC
ACCGTGAACG ACTACCTCGC CAAACGCGAC GCCGATTGGA TGGGGCAGAT ATTCCGCTTC
CTCGGTCTCG AAGTAGGCGT CGTCCTGCAT GGCCTCGACG ACAACCAGCG CCGCGCCGCC
TATGCCGCCG ACATTACCTA CGGCACCAAT AACGAATACG GTTTCGACTA TCTGCGCGAC
AACATGAAGT ACCAGCTCGC CTCCATGGTG CAGCGCGGGC ACGGTTTCGC GATCGTCGAC
GAAGTGGACT CGATCCTGAT CGACGAAGCG CGTACGCCCC TGATCATTTC AGGCCCTCTC
GACGACAAGT CGGACCTCTA TCTTTCCATC GACGAAGTCA TTCCCGAGAT CGGCGAGGAG
GACTACGAGC TCGACGAGAA GCAGCGGACC GTGAACCTCA CCGAGGAAGG CAATGAGCGC
GTCGAGGAAA TCCTCCGCAA TCGCGGCATC ATGCTGGAGG GCAACCTCTA CGACATCGAG
AACATCTCGA TCGTCCACCA TGTGAACAAC GCGCTTCGCG CGCACAAGCT GTTCCAGAAG
GACAAGGACT ACATCGTCAA GACGGGCAAG GTCGTCATCA TCGACGAATT CACCGGCCGC
ATGATGGAAG GCCGCCGCTA TTCCGACGGG CTGCACCAGG CGCTCGAAGC GAAGGAGCGC
GTGCCGATCC AGCCGGAAAA CCAGACGCTG GCCTCGATTA CTTTCCAGAA TTACTTCCGC
ATGTATGAAA AGCTGTCCGG CATGACCGGC ACGGCGCTGA CGGAAGCGAG CGAGTTCGGC
GATATTTACG GCCTCGACGT GCTGGAAATT CCCACCAACA AGCCGATTGC CCGTATCGAC
GAGGACGACG AGGTCTATCG CACGACCCGC GAAAAATACG AGGCCATGAT CGGCGAGATC
GAGGAATGCG CCTCGCGCGG CCAGCCGGTT CTCGTCGGCA CGACCTCCAT CGAGAAATCC
GAGACGCTTT CCGAACTTCT GAAGAAGAAG AAGGTGAAGC ACAAGGTGCT GAACGCGCGC
TACCACGAGC AGGAAGCGCA TATCGTGGCG CAGGCGGGCG TACCCGGCAA TGTGACCATC
GCCACCAACA TGGCGGGCCG CGGCACCGAC ATCCAGCTCG GCGGCAACCT GGACATGCGC
CTCGCGGATG AAACCGCCGG CATCGAGAAC GAAGCGGAGC TTGCCCGCAA GACCGCCGAA
GTGAAAGCCG ACATCGAAGC GAAGAAACAG CGCGCGCTTG AAGCGGGCGG GCTCTACGTC
ATCGGCACGG AACGCCACGA AAGCCGCCGC ATCGACAACC AGCTACGCGG CCGCTCCGGC
CGTCAGGGCG ATCCCGGCCG GTCGAAATTC TACCTTTCGC TCGAAGACGA CCTGATGCGC
ATTTTCGGCA CCGACCGCAT GGACGGGATG CTGCAGAAGC TCGGGCTCCA GGAGGGCGAA
GCCATCGTCC ATCCCTGGAT CAACAAGGCA CTCGAAAAGG CGCAGCAGAA GGTCGAGGCG
CGCAACTTCG ACATCCGCAA GAACCTGCTC AAGTTCGACA ATGTGATGAA CGACCAGCGC
CGCGCGATTT TCGAACAGCG CATCGAGCTG ATGCGCGCCG AAGATGTGTC GGACACGGTT
GACGACATGC GCCGGCAGGT GATCGACGAC ATGGTCGCCG CGCATGTGCC GGAAAAAGCC
TATGCGGAAC AATGGGACAT GGCGGGCCTG AAGGAAGAGG TGAAGAAGAA CCTCGACCTC
GACCTGCCGA TCGAGACCTG GGCCGATGAA GAAGGCATCG CCGAGGAAGA AATCCGCGAG
CGTCTCTATT CGGCTTCCGA TCGCCATATG GCGTCGAAGG CGGCACAGGT CGGCCCGGAT
CTCATGCGGC AGGTCGAAAA GGCCGTGCTG CTGCAGACGC TCGACCAGCA TTGGCGCGAA
CATCTGATGA TGCTCGATCA TCTGCGCCAG GCCGTCGGCC TGCGCGGCTA TGCGCAGCGC
GATCCGCTCA ACGAATACAA GTCCGAGGCC TTCGAGCTTT TCGAAAGCCT GCTGGCACGC
CTGCGTGAAA ATGTGACGCG GCAGCTATCG GTTGCCCAGT TCATCACCGA GGCGCCGCGC
ATCGAGGAGC AGCCCCTGCC GGAAATGCAG GCGCACCACA CAAATCCGCT GACCGGCGAA
GACGAGATGG CGGACGGAGA CGTGGCGACA ATGCAGCGTC CCATGCGCAA CGACCCGGGC
GTTGCCGCCG ATCCGAACGA TCCGCGCACT TGGGGCAAGA CACCCCGCAA CGCGCCCTGC
CCCTGCGGCT CCGGCAAGAA ATACAAGCAC TGTCACGGCG CTCTGTGA
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| Protein sequence | MAAAAKARLI DKGGSPPYIE GAPQEEIHLM ASLGAFAKRL FGSSNDRRIK AYKARVEAIN
ALEPDMIALS DDALRGKTAE FRARLADGAV LDELLPEAFA VVREAAKRSL GQRHYDVQLI
GGMVLNDGNI AEMKTGEGKT LVSTLAAYLN ALTGKGVHVV TVNDYLAKRD ADWMGQIFRF
LGLEVGVVLH GLDDNQRRAA YAADITYGTN NEYGFDYLRD NMKYQLASMV QRGHGFAIVD
EVDSILIDEA RTPLIISGPL DDKSDLYLSI DEVIPEIGEE DYELDEKQRT VNLTEEGNER
VEEILRNRGI MLEGNLYDIE NISIVHHVNN ALRAHKLFQK DKDYIVKTGK VVIIDEFTGR
MMEGRRYSDG LHQALEAKER VPIQPENQTL ASITFQNYFR MYEKLSGMTG TALTEASEFG
DIYGLDVLEI PTNKPIARID EDDEVYRTTR EKYEAMIGEI EECASRGQPV LVGTTSIEKS
ETLSELLKKK KVKHKVLNAR YHEQEAHIVA QAGVPGNVTI ATNMAGRGTD IQLGGNLDMR
LADETAGIEN EAELARKTAE VKADIEAKKQ RALEAGGLYV IGTERHESRR IDNQLRGRSG
RQGDPGRSKF YLSLEDDLMR IFGTDRMDGM LQKLGLQEGE AIVHPWINKA LEKAQQKVEA
RNFDIRKNLL KFDNVMNDQR RAIFEQRIEL MRAEDVSDTV DDMRRQVIDD MVAAHVPEKA
YAEQWDMAGL KEEVKKNLDL DLPIETWADE EGIAEEEIRE RLYSASDRHM ASKAAQVGPD
LMRQVEKAVL LQTLDQHWRE HLMMLDHLRQ AVGLRGYAQR DPLNEYKSEA FELFESLLAR
LRENVTRQLS VAQFITEAPR IEEQPLPEMQ AHHTNPLTGE DEMADGDVAT MQRPMRNDPG
VAADPNDPRT WGKTPRNAPC PCGSGKKYKH CHGAL
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