Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_1726 |
Symbol | |
ID | 5455958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 1865966 |
End bp | 1867732 |
Gene Length | 1767 bp |
Protein Length | 588 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640877301 |
Product | citrate transporter |
Protein accession | YP_001413002 |
Protein GI | 154252178 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0471] Di- and tricarboxylate transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATTTG AGCAGGGATT GTCGTTCGGC ATCCTCGCAC TCGCACTGGT GCTCTTCGCC TCCGGCAAGC TGCGCCACGA CATCGTTGCG CTGATTGCGC TGATCGCGGT ATCGCTCGCA GGCCTGGTTG ACAGGAACCA GATACTCGCC GGTTTTGGCC ATCCCGCAGT CATCACCGTG GCGGCCGTTC TCGTCGTTTC CGAAGCATTG CGCTCGTCCG GCCTTGTGGA TGTCATCGTG CGCCGTATCG GCCCGCTGAC GCGAACCAAT ATCGGTCATA TCGCGGTGCT GACCGGCATC GTCGCCCTTG CCTCCTCCTT CATGAACAAT GTCGGAGCCC TCGCCGTGAT GCTGCCTGTC GCGCTCGCGA CGGCGGCAGA GCGCAACAGG CCGCCGGCAA TCCTGCTGAT GCCGCTTGCC TTCGGCTCGA TGCTGGGCGG CATGATTACG CTGATCGGAA CACCGCCCAA TATCATCATT GCGAGCTTCC GCCATTCCTA CACAGACGAG GCATTCGGAA TGTTCGATTT CGCCTGGGTA GGTCTGCCGG TCGCCATTAT CGGCATTCTG TTCATCTCGC TCGGCGCATC GCGCTTGATC CCGCGCGGAC GCAAGGGCGG CGCCGCCGAA ATGTTCAGCC TTGAGGAATA CATCATCGAG GTGCGGGTGA AAGAGAAGAG TCCTCTCGTC GGCAAACGAG TTGCGCATAT GAAAAGTGCG ATGAACGAGG ACGTGGCAAT TGCGGCCCGC ATACGCGACA ACGGCGAGCT TTACGAACCC GAGAACTGGC AGCCAATCGC TGCAGGCGAT CTCTTCATCC TGCGCGCGGA TCCGGCCGAC CTGACGGAGT TTTTCGACAA CCAGGGACTG GAACTGGTGG CGACAGATGG CTCTGGCGAC GCCCACGAGC CAGACCTCAG GCTGGTCGAG GCAATCGTCG GCCCGAACTC CCCGCTTATA GGCTTCGGCC CCCGGACGCT GATGCGCCGC GCACCGGAAG ACTTCAACCT TTTCGCCGTG GCGCGGCAGG GCCAACCCAT CGGCGGCCGC CTCCACAATG TGCGCTTCCA GACGGGAGAC GTGCTGCTGC TCCAGACGCA TGATGGGGAA GAATCGGCAT TCCCGGCGGA GCTCGGCCTC CTGCCATTGC CGGAGCGCGG GCTTCGTCTC GGTGGGCCAC GGCGTCTCGG CACCGCCTTC ACAATTTTCG CGGGTGCCAT CGTCCTCTCG ATGACGGGCG TCCTGCCGCT CGCGGTCGCA TTTCTTGCTG CTGTCGTCCT CTATGTCGTC ATCGGCATCC TGCCGCTTCG CGATCTTTAC CGGCACATCG ACTGGCCGGT GATCGTGTTG CTGGGCGCGA TGATACCGGT GGGTCAGGCG CTGCAGAACA CGGGTGCAGA CGTACTGGTC GCAGAAAGCA TTGTCGCGAC GGCGGGCATG TTCCCGCCTT GGGCGATACT TACGCTCCTG CTTGTCGTCA CGATGTTCGT TACGGATATC ATCAACAATG CGGCGACGGC GCTCATCATG GCGCCGATTT CAATCGCCAT CGCGCAGACA CTCGGCGTGA ACCCGGACGC ATTCCTGATG GCAGTGGCGG TGGGCGCGAG TTGTTCTTTC CTGACACCTA TCGGGCATCA GTCGAGCACC CTGGTGATGG GGCCGGGCGG CTATAAATTC TCGGACTATT GGCGGCTCGG CCTGCCGCTC GAAATTGTGG TGACGCTCGT CGCCGTGCCG ATGATCCTTT TCGCCTGGCC CCTTTAG
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Protein sequence | MTFEQGLSFG ILALALVLFA SGKLRHDIVA LIALIAVSLA GLVDRNQILA GFGHPAVITV AAVLVVSEAL RSSGLVDVIV RRIGPLTRTN IGHIAVLTGI VALASSFMNN VGALAVMLPV ALATAAERNR PPAILLMPLA FGSMLGGMIT LIGTPPNIII ASFRHSYTDE AFGMFDFAWV GLPVAIIGIL FISLGASRLI PRGRKGGAAE MFSLEEYIIE VRVKEKSPLV GKRVAHMKSA MNEDVAIAAR IRDNGELYEP ENWQPIAAGD LFILRADPAD LTEFFDNQGL ELVATDGSGD AHEPDLRLVE AIVGPNSPLI GFGPRTLMRR APEDFNLFAV ARQGQPIGGR LHNVRFQTGD VLLLQTHDGE ESAFPAELGL LPLPERGLRL GGPRRLGTAF TIFAGAIVLS MTGVLPLAVA FLAAVVLYVV IGILPLRDLY RHIDWPVIVL LGAMIPVGQA LQNTGADVLV AESIVATAGM FPPWAILTLL LVVTMFVTDI INNAATALIM APISIAIAQT LGVNPDAFLM AVAVGASCSF LTPIGHQSST LVMGPGGYKF SDYWRLGLPL EIVVTLVAVP MILFAWPL
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