| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1726 |
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| Symbol | |
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| ID | 5455958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1865966 |
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| End bp | 1867732 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640877301 |
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| Product | citrate transporter |
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| Protein accession | YP_001413002 |
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| Protein GI | 154252178 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0471] Di- and tricarboxylate transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATTTG AGCAGGGATT GTCGTTCGGC ATCCTCGCAC TCGCACTGGT GCTCTTCGCC
TCCGGCAAGC TGCGCCACGA CATCGTTGCG CTGATTGCGC TGATCGCGGT ATCGCTCGCA
GGCCTGGTTG ACAGGAACCA GATACTCGCC GGTTTTGGCC ATCCCGCAGT CATCACCGTG
GCGGCCGTTC TCGTCGTTTC CGAAGCATTG CGCTCGTCCG GCCTTGTGGA TGTCATCGTG
CGCCGTATCG GCCCGCTGAC GCGAACCAAT ATCGGTCATA TCGCGGTGCT GACCGGCATC
GTCGCCCTTG CCTCCTCCTT CATGAACAAT GTCGGAGCCC TCGCCGTGAT GCTGCCTGTC
GCGCTCGCGA CGGCGGCAGA GCGCAACAGG CCGCCGGCAA TCCTGCTGAT GCCGCTTGCC
TTCGGCTCGA TGCTGGGCGG CATGATTACG CTGATCGGAA CACCGCCCAA TATCATCATT
GCGAGCTTCC GCCATTCCTA CACAGACGAG GCATTCGGAA TGTTCGATTT CGCCTGGGTA
GGTCTGCCGG TCGCCATTAT CGGCATTCTG TTCATCTCGC TCGGCGCATC GCGCTTGATC
CCGCGCGGAC GCAAGGGCGG CGCCGCCGAA ATGTTCAGCC TTGAGGAATA CATCATCGAG
GTGCGGGTGA AAGAGAAGAG TCCTCTCGTC GGCAAACGAG TTGCGCATAT GAAAAGTGCG
ATGAACGAGG ACGTGGCAAT TGCGGCCCGC ATACGCGACA ACGGCGAGCT TTACGAACCC
GAGAACTGGC AGCCAATCGC TGCAGGCGAT CTCTTCATCC TGCGCGCGGA TCCGGCCGAC
CTGACGGAGT TTTTCGACAA CCAGGGACTG GAACTGGTGG CGACAGATGG CTCTGGCGAC
GCCCACGAGC CAGACCTCAG GCTGGTCGAG GCAATCGTCG GCCCGAACTC CCCGCTTATA
GGCTTCGGCC CCCGGACGCT GATGCGCCGC GCACCGGAAG ACTTCAACCT TTTCGCCGTG
GCGCGGCAGG GCCAACCCAT CGGCGGCCGC CTCCACAATG TGCGCTTCCA GACGGGAGAC
GTGCTGCTGC TCCAGACGCA TGATGGGGAA GAATCGGCAT TCCCGGCGGA GCTCGGCCTC
CTGCCATTGC CGGAGCGCGG GCTTCGTCTC GGTGGGCCAC GGCGTCTCGG CACCGCCTTC
ACAATTTTCG CGGGTGCCAT CGTCCTCTCG ATGACGGGCG TCCTGCCGCT CGCGGTCGCA
TTTCTTGCTG CTGTCGTCCT CTATGTCGTC ATCGGCATCC TGCCGCTTCG CGATCTTTAC
CGGCACATCG ACTGGCCGGT GATCGTGTTG CTGGGCGCGA TGATACCGGT GGGTCAGGCG
CTGCAGAACA CGGGTGCAGA CGTACTGGTC GCAGAAAGCA TTGTCGCGAC GGCGGGCATG
TTCCCGCCTT GGGCGATACT TACGCTCCTG CTTGTCGTCA CGATGTTCGT TACGGATATC
ATCAACAATG CGGCGACGGC GCTCATCATG GCGCCGATTT CAATCGCCAT CGCGCAGACA
CTCGGCGTGA ACCCGGACGC ATTCCTGATG GCAGTGGCGG TGGGCGCGAG TTGTTCTTTC
CTGACACCTA TCGGGCATCA GTCGAGCACC CTGGTGATGG GGCCGGGCGG CTATAAATTC
TCGGACTATT GGCGGCTCGG CCTGCCGCTC GAAATTGTGG TGACGCTCGT CGCCGTGCCG
ATGATCCTTT TCGCCTGGCC CCTTTAG
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| Protein sequence | MTFEQGLSFG ILALALVLFA SGKLRHDIVA LIALIAVSLA GLVDRNQILA GFGHPAVITV
AAVLVVSEAL RSSGLVDVIV RRIGPLTRTN IGHIAVLTGI VALASSFMNN VGALAVMLPV
ALATAAERNR PPAILLMPLA FGSMLGGMIT LIGTPPNIII ASFRHSYTDE AFGMFDFAWV
GLPVAIIGIL FISLGASRLI PRGRKGGAAE MFSLEEYIIE VRVKEKSPLV GKRVAHMKSA
MNEDVAIAAR IRDNGELYEP ENWQPIAAGD LFILRADPAD LTEFFDNQGL ELVATDGSGD
AHEPDLRLVE AIVGPNSPLI GFGPRTLMRR APEDFNLFAV ARQGQPIGGR LHNVRFQTGD
VLLLQTHDGE ESAFPAELGL LPLPERGLRL GGPRRLGTAF TIFAGAIVLS MTGVLPLAVA
FLAAVVLYVV IGILPLRDLY RHIDWPVIVL LGAMIPVGQA LQNTGADVLV AESIVATAGM
FPPWAILTLL LVVTMFVTDI INNAATALIM APISIAIAQT LGVNPDAFLM AVAVGASCSF
LTPIGHQSST LVMGPGGYKF SDYWRLGLPL EIVVTLVAVP MILFAWPL
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