Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_1700 |
Symbol | |
ID | 5454366 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 1837643 |
End bp | 1840039 |
Gene Length | 2397 bp |
Protein Length | 798 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640877275 |
Product | multi-sensor signal transduction histidine kinase |
Protein accession | YP_001412976 |
Protein GI | 154252152 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 0.0658643 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGGTG CGAGCATCCA TAAAGATCGA AGCGCGGAGC ACTGGCCCAG TCAGCCGGAG ATTCCGCTCG CCGGCACTTC CGAAGACGGA CTCTTATCTC CTTCGCGGTC TCAGGATATT CGTCTCGAGC TCTACCGCAC CATCATGCGC GCCTACCGGA CGCTGCCGGT TTTTTTCCCC ACCGTCGCGA TGGCGCTCGC CTTTACGTTC AATACCACCT ATCCCGAGAT GCTGGTCGCG GCATGGTGGT TCGTCCTCCT CGCCGTCCAT GTTGAATATG CATTCTTCCA GCGCCGCTTT TTTGCGGAGG ACAGTGCCGC TATCGACGTC GATGCCTGGA TAAAGGCGAC CGCGATCCGC TACTGGATCA TGAATGTCGT CTGGCTTGGC CTGCTCCCCC TTTTCTGGCA CCCGGGATCG GACGTACAGA ACCTTGCCAT ACTGATGGTT TTCGTCGTGC ATGTCGTGAT GGCGTCACAG ACGGCCTTCC ATCTTGTGCC GATCTTTGTC TCCGTCACTC TGCCGCTGAT AGCGGTCGTC ATCGCGGTAA GCATCTGCAC CCTTGAAGCG GCTTATATGG CAATCGGGTT CGGTTGCATC CCGACATATC TCTACCTCGC GCGGATCGCA CAACAGCAAC GGGCCGCGGC CTACGAGACC TTCAACCTGC GCTTCCGCAA TGCGGACCTC ATCCGCGACA TCGGCAAGGC ACGCGACCTG TCGGAAGAGG CGAGGCTGCG GGCGGAAGAA GCAAACGCCC AGCTTCAGCG CCGGGAGCAT CATTTTCGCG CGCTGGTCGA AAATGCATTC GACGTCGTTC TCGTGACGGA TGAACAGGCG ATCATCCGGT ACGCTTCTCC CGCAGCAGAA AAAATCGGCC TCTCCATCGA CGCCCTTATC GGCATGAACA GCCTCGACTT CCTGACGAAG GAACAGAAAG AAGAGCTTCT GAAAGACGTC GCGCCGGGAA ATGGCGCGTC CAGAGTGCTG ACTTATGAAC TATTGGTCCC CCGTCAGGAC GATCGAAGCA TATGGATCGA AGCAACGCTT ACCAACCTGC TCCACGATGA AAACGTGCGC GGCTATGTCG TAAATCTACG CGATATAACC GAGCGTAAAC GCGCCGAGAC GGAACAGCGC AGCCAGTTTG GCGTGCTCCG TGCGCTTGCA ACCGGCGTGG AGCTCGGCGA GGTCATGTCC CGGCTTGCGC TGGGTTCGGA AGAAGCGCAT CCGGGTGCCC GGGCGGCGGT CTTCCTGCTG GACGCGAAAG AAGACTTGAT CACTTGCGCC GCGCCGCACC TTCCCGCCGA TTTTCCCGAA TGGGTGGGGG GCTTCTGGCA AAGCCAGAAA GACCACGACT TCGGCAGAAT GGCGCTCGCA GGACATAAGA TCGTCGCGAC GGACCTGCAG GAAGAACACC ATGGTGAATC CATATCGAGC TATATGCGCG GGGCGGGCAT CAGCACGGTC TGGTTCAAGC CCATCCTGTC GCGAAGCGGC AAGGTCATCG GCGCCTTCGC CATGTATTTC GCGGAGGCGC GAACGCCCGG CAAATGGGAA GAAGATTATG TAATGGGCGC TGCTCACCTT GCCAGCATCG CCATCGAACG CCGTCGCGCG GAAGAAGGTC TGCGGCAGGC GACGGAAACG GCGGAAATGG CAAACCGCGC GAAAACAAAA TTCCTTGCGA ACATGAGCCA TGAGCTGCGC ACGCCGCTCA ACGCCATTAT CGGCTTTTCC GAAATCATGA GTCAGGAAAT GTTCGGCCCG CTCGGCAGCG ACCGCTACCG GGAATATACG AACGACATCC ATGGCAGTGG CCGCCATCTT CTCAACGTCA TCGACGATAT CCTCGATATT TCCAAGATCG AGGCCGGCCG CTACGTCCTT GAGGAAGACG AGATCGACAT GGCGCATGTG CTCAAGTGGT CGGTCGAGAT GATGCGCGCG CGCACGCTCG AGAAACGCCA GAACGTGAAT CTGCACTTGC CCGAGGCCAT ACCGAATGTG CGGGCGGATC AGCGCGCCAT GCGCCAGATC ATGCTGAACC TTCTTTCCAA TGCGTCGAAG TTTACGCCCG CTGAAGGTCG CATCGATCTG AACGTCAGCA GGAATGACGC CGGCGATCTC ATGGTTTCAG TTGCGGATAG CGGCATCGGC ATTCCCCGCA ACAAGCTTGA CGAAGTGCTG GAACCCTTCG GGCAAGTCGA CGACACAAGC GCACGTCAGC ACGGCGGCAC CGGCCTCGGC CTTCCGATTA CCAAGTCGCT CATCGAAATG CATGGCGGCA GCTTCACCCT CGAAAGCACT CTCGGCGCAG GCACCACGGC AACGATGATA TTCCCGGCGC ATCGGCTTCT TTCGCTTGAG GGCAAAAGCA AAACCGCCGC GCATTGA
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Protein sequence | MPGASIHKDR SAEHWPSQPE IPLAGTSEDG LLSPSRSQDI RLELYRTIMR AYRTLPVFFP TVAMALAFTF NTTYPEMLVA AWWFVLLAVH VEYAFFQRRF FAEDSAAIDV DAWIKATAIR YWIMNVVWLG LLPLFWHPGS DVQNLAILMV FVVHVVMASQ TAFHLVPIFV SVTLPLIAVV IAVSICTLEA AYMAIGFGCI PTYLYLARIA QQQRAAAYET FNLRFRNADL IRDIGKARDL SEEARLRAEE ANAQLQRREH HFRALVENAF DVVLVTDEQA IIRYASPAAE KIGLSIDALI GMNSLDFLTK EQKEELLKDV APGNGASRVL TYELLVPRQD DRSIWIEATL TNLLHDENVR GYVVNLRDIT ERKRAETEQR SQFGVLRALA TGVELGEVMS RLALGSEEAH PGARAAVFLL DAKEDLITCA APHLPADFPE WVGGFWQSQK DHDFGRMALA GHKIVATDLQ EEHHGESISS YMRGAGISTV WFKPILSRSG KVIGAFAMYF AEARTPGKWE EDYVMGAAHL ASIAIERRRA EEGLRQATET AEMANRAKTK FLANMSHELR TPLNAIIGFS EIMSQEMFGP LGSDRYREYT NDIHGSGRHL LNVIDDILDI SKIEAGRYVL EEDEIDMAHV LKWSVEMMRA RTLEKRQNVN LHLPEAIPNV RADQRAMRQI MLNLLSNASK FTPAEGRIDL NVSRNDAGDL MVSVADSGIG IPRNKLDEVL EPFGQVDDTS ARQHGGTGLG LPITKSLIEM HGGSFTLEST LGAGTTATMI FPAHRLLSLE GKSKTAAH
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