Gene Plav_1689 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1689 
Symbol 
ID5455862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1824641 
End bp1825360 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content63% 
IMG OID640877263 
Productputative phage repressor 
Protein accessionYP_001412965 
Protein GI154252141 
COG category[K] Transcription 
COG ID[COG2932] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.0556751 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGTAG CGACCCGCCT TGGGCACATA CGCAAGTTTC TTGGTCTTTC GCAGAAGGAT 
ATGGCCAGGC GATTCGGTGT GTCGGGCACG ACCTGGCAGA ATTACGAACT GGAGAACGCA
GCACCGAACG CGCATGTGCT CGGGCGTCTT TCCGGCGAGG GCTTCAATAT CAACTGGGTG
CTGACGGGCA TGGGCGAGAT GCGCGCCGGC GAGCGGAAGA TGATGGAGAA GCCGACCGGC
TTTGCCGAAC TCGAACCGCT GGAGCTGGAA GGCATCGCCG CATCGAGAAA GCATGTCCTT
ATCCCGCGCT ATGCGCTGCG GACGCTGCCA CGCGAGGGCG GCGAGGCGGC CATGACGATG
GAGGAGGTCT CACTTCTCGA CACCATCGCC TTCCGCCGCG ATTTCATCGA GAGCGACCTG
AAGGCGGACC CTGCCAGCCT CATCGCCATA GAGGCCGCCG ATAATTCCAT GTCGCCAACG
TTCGGGCCCG GCGACATCCT GCTTGCGGAT ACGTCCGAAC CGCGCCTGCG CGGCAGCGGC
ATCTATGTCT TTGCGAGCGG CGGCGCGCTG CTCGTGAAGC GCCTGCAGGT GAAACTCGAC
GGCGGCTTCA TCGTCTCCAG CGACAATGCC GAACTTTATC CGGCCGAAGA GATTGAGCGG
ACCGCCCTCG AAAGGGTAAA GATCGTCGGC CGCGTGATCT GGCGCGGCGG ACGCCTGTAA
 
Protein sequence
MTVATRLGHI RKFLGLSQKD MARRFGVSGT TWQNYELENA APNAHVLGRL SGEGFNINWV 
LTGMGEMRAG ERKMMEKPTG FAELEPLELE GIAASRKHVL IPRYALRTLP REGGEAAMTM
EEVSLLDTIA FRRDFIESDL KADPASLIAI EAADNSMSPT FGPGDILLAD TSEPRLRGSG
IYVFASGGAL LVKRLQVKLD GGFIVSSDNA ELYPAEEIER TALERVKIVG RVIWRGGRL