Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_1660 |
Symbol | |
ID | 5456527 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 1792416 |
End bp | 1793987 |
Gene Length | 1572 bp |
Protein Length | 523 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640877234 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_001412936 |
Protein GI | 154252112 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.104845 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 0.559317 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGGATA TCGCACAGGT TCGCTCGGTA GCCGACATCA CGCGGGTATG GGGCTCGGGC GCGCCGGATG CCATCGCGCA GGTCTTCGAG GGGCGGGAAA CGAGCTATGG CGAGCTGGAC CGCCGCGCCA GCCAGGTCGC GCAGGCGCTG ATCGCGGATG GCTGCAAGCC CGATGCCCGC ATCGGTTTCA TGGGCAAGGG GTCCGACCGC TATTTCGAAA TGCTCTATGG CGCCTTCAAG GCGAAGGCCG TCGTCGTGGG CGTCAACTGG CGTCTCGCGC CGCCGGAGGT TGCCTATGTG CTGAATGACA GCCGTACCGA AATCCTGTTC GTCGGCGCTG AATTCTACGA CATCGTGGAA AAGGTGCTGC CGGAGTGTCC GACGGTGCGC AAGGTGATCG CGCTTGATGG CGGCCGCAAC GACTGGACCT CCTTCGACGA TTGGCGCGAT GCCGCGAAAT CCGAAGATCC GATGCTGCCC GCCGATCCCG ACGATGACGT GATCCAGCTC TATACGAGCG GTACCACCGG CCATCCGAAA GGCGTGCAGC TTACAAATGC CAATTACATG TCGATCTTCG CCCAGGGCGG CGAGGCCGGC TGGGCAAATT GGGGCGAGGG CGAAGTTGCG CTGGTCTGCA TGCCGCTGTT CCATGTCGCG GGCGTCAATA TCGGCCTCAT CGGCAATATC CACGGCTGCA AGAACATCAT TTTGAAGGAT GTCGATCCGC AGGCGATCCT GAAGCTCATC GAGAGCGAGA AGATCAACAT CGCCTTCATG GTGCCTGCCG TCATTCTCTT CCTCCTGCAG CAGCCCAACA TGGCGACGAC GGACGTTTCG TCGATCCGCC AGATCCTCTA CGGCGCTTCG CCGATTGCCG AAGACGTGCT GCGCCGGGCG CAGGATACGT TCAAGGGCGC CGACTTCGTG CAAGTCTACG GCCTCACCGA AACGGCGGGC GGCGCGACCA ACCTGCCGCC GGAGGCGCAT GATCCCGCCA AGGGCAAGCT CCGCTCCTGC GGCATCCCCA ATCCCGGCAT GGAAGTGCGC GTGGTGGACG ACAAGGGCGC CGATGTGCCG ACCGGCGAGG TCGGCGAAAT CGTCATTCGC GGTGCTTCGA TCATGAAGGG CTACTGGAAC CGCGCCGACG CAACGAAGGA TGCGATCCGC GACGGCTGGT TCTATACGGG CGACGCCGGC TTCTTCGACA ATGACGGCTA TCTCTTCATC CATGACCGGG TGAAGGACAT GATCGTGTCG GGCGGTGAAA ACATCTATCC CGCCGAAGTC GAGAATGCGC TTTTCGGCCA TGCCGCCATT GCCGATGCCG CCGTCATCGG CGTGCCGGAC GAGAAGTGGG GCGAAGCGGT AAAGGCCATC GTCGTTCTGA AGCCTGGCGA GCAAGCCACA CCGGAAGAGA TCATCGCCTT CGCGAAGACG CGTATCGCCA GCTACAAGGT GCCGAAATCG GTCGATTTCA TCCAGGCGCT GCCGCGCAAT CCGTCGGGAA AGATTCTCCG GCGCGAGCTG CGCGCACCGT TCTGGGAAGG CCGCGCGCGC ATGGTCAACT GA
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Protein sequence | MVDIAQVRSV ADITRVWGSG APDAIAQVFE GRETSYGELD RRASQVAQAL IADGCKPDAR IGFMGKGSDR YFEMLYGAFK AKAVVVGVNW RLAPPEVAYV LNDSRTEILF VGAEFYDIVE KVLPECPTVR KVIALDGGRN DWTSFDDWRD AAKSEDPMLP ADPDDDVIQL YTSGTTGHPK GVQLTNANYM SIFAQGGEAG WANWGEGEVA LVCMPLFHVA GVNIGLIGNI HGCKNIILKD VDPQAILKLI ESEKINIAFM VPAVILFLLQ QPNMATTDVS SIRQILYGAS PIAEDVLRRA QDTFKGADFV QVYGLTETAG GATNLPPEAH DPAKGKLRSC GIPNPGMEVR VVDDKGADVP TGEVGEIVIR GASIMKGYWN RADATKDAIR DGWFYTGDAG FFDNDGYLFI HDRVKDMIVS GGENIYPAEV ENALFGHAAI ADAAVIGVPD EKWGEAVKAI VVLKPGEQAT PEEIIAFAKT RIASYKVPKS VDFIQALPRN PSGKILRREL RAPFWEGRAR MVN
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