Gene Plav_1608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1608 
Symbol 
ID5453390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1744759 
End bp1745508 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content61% 
IMG OID640877181 
Productelectron transfer flavoprotein alpha/beta-subunit 
Protein accessionYP_001412884 
Protein GI154252060 
COG category[C] Energy production and conversion 
COG ID[COG2086] Electron transfer flavoprotein, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones77 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTCC TCGTCCCGAT CAAGCGAGTG GTCGATTACA ACGTGAAAGT CCGAGTGAAA 
TCGGACGGCA GCGGCGTCGA TCTCGCCAAT GTCAAAATGT CGATGAACCC GTTCGACGAG
ATCGCCGTTG AAGAAGCGGT GCGCCTCAAG GAAGCGGGCA AGGCGACGGA AGTCGTCGCC
GTTTCAATCG GCGTCCAGCA GACCACCGAA ACCATCCGCA CCGCGCTCGC CATGGGCGCC
GACCGCGGCA TCCTGGTGAA GACGGACGAA ACCGTCGAAC CGATCAACGT CGCCAAGATC
CTGAAGGCCG TGGCCGAGCA GGAACAGCCC GGCCTCATCA TTCTGGGCAA GCAGGCGATC
GACGACGATT GCAACCAGAC AGGCCAGATG CTCGCCGCCC TTCTCGGCTG GGCACAGGGC
ACCTTCGCCT CCAAGGTCGA GATCGACGGC GAGACGCTGA ACCTGACCCG CGAAATCGAC
GGCGGATTGC AGGTGCTGAA GCTCAAGATG CCGGCCGTCA TCACGACGGA CCTGCGCCTC
AACGAGCCGC GCTATGCATC GCTGCCGAAC ATCATGAAGG CGAAGAAGAA GCCGATCGAC
GAGAAGGCAC CGGGCGACTA CGGCGTCGAC GTGAAGCCGC GCCTCGAAGT GCTGAAAGTA
AGCGAGCCGC CGCAGCGTTC GGCCGGTATC AAGGTCGAAA CGATTGAGCA GCTCGTATCG
AAGCTGAAGG AAGCGGGAGT GATCGGATGA
 
Protein sequence
MKVLVPIKRV VDYNVKVRVK SDGSGVDLAN VKMSMNPFDE IAVEEAVRLK EAGKATEVVA 
VSIGVQQTTE TIRTALAMGA DRGILVKTDE TVEPINVAKI LKAVAEQEQP GLIILGKQAI
DDDCNQTGQM LAALLGWAQG TFASKVEIDG ETLNLTREID GGLQVLKLKM PAVITTDLRL
NEPRYASLPN IMKAKKKPID EKAPGDYGVD VKPRLEVLKV SEPPQRSAGI KVETIEQLVS
KLKEAGVIG