| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1597 |
|---|
| Symbol | |
|---|
| ID | 5453594 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | + |
|---|
| Start bp | 1734168 |
|---|
| End bp | 1734713 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640877170 |
|---|
| Product | hypoxanthine phosphoribosyltransferase |
|---|
| Protein accession | YP_001412873 |
|---|
| Protein GI | 154252049 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0634] Hypoxanthine-guanine phosphoribosyltransferase |
|---|
| TIGRFAM ID | [TIGR01203] hypoxanthine phosphoribosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 0.896706 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 62 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGCC TCGCGCCGAA GGGTGCCCGC ATCAAGGTGC TTTATCCGGC GGAGGAGATT
GCGGCGAGGG TGCGGGCGCT CGCGGCGGAT GTGTCGGCTG CGGCTGGTGC CGATCCGCTC
GTCATTCCGA TCCTCAAGGG AAGTTTCATT TTCGCCGCCG ATCTTCTGCG CGCGCTGCAT
GAGGCGGGCG TCGAGCCGGA CATGGATTTC ATCAGCCTTT CGAGCTACGG CGCGGGCACC
ACGTCGCTCG GCGAAGTCCG CATTGTGCGC GACACGGAAG CCGTGGTCTC CGGGCGCGAT
GTTCTCATCG TCGACGATAT CCTCGAATCG GGCCGCACGC TTGCCTTCGC CAAGGATCTG
ATGGCGGCGC GTGGCGCGCG CAGCGTCAGG ACATGCGTTC TCTTGCGCAA GCCGGGCAAG
CTCGCGGTCG ATATCGAGGC GGATTTCGTC GGCTTCGACT GTCCGGATCG TTTTGTCGTG
GGCTACGGCA TGGATGTGGC GCATGCTTTT AGACAGTTGC CCTTTGTCGG CTATGTGGAG
CCTTGA
|
|---|
| Protein sequence | MSSLAPKGAR IKVLYPAEEI AARVRALAAD VSAAAGADPL VIPILKGSFI FAADLLRALH
EAGVEPDMDF ISLSSYGAGT TSLGEVRIVR DTEAVVSGRD VLIVDDILES GRTLAFAKDL
MAARGARSVR TCVLLRKPGK LAVDIEADFV GFDCPDRFVV GYGMDVAHAF RQLPFVGYVE
P
|
|---|
| |