Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_1532 |
Symbol | |
ID | 5454544 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 1667673 |
End bp | 1669364 |
Gene Length | 1692 bp |
Protein Length | 563 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640877105 |
Product | cytochrome c oxidase, cbb3-type, subunit I |
Protein accession | YP_001412808 |
Protein GI | 154251984 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 0.94152 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGTTT CAGGGGCGCC GGGAGTAAAG CTTCCGGGGA CGATGACGAC TGCGGCCTGG CTGGTCGCGG GGGCGCTCGT CGCAGGAGCA CTTCTTTCAA TCGTAGTTGC AGGCAAAGCA CAGGACGCGC CGATTGCCGC CCATGCCTGG CTCTTTGCCT TCTCTTTCCT GGCAGGCGCC ATGGCCCTCT GGCAGCGCCA CTTCTCGGCC GAAGCGCGCG GCCCGGCGGC AATCGACGAA AGCGCCGGCT ACAATGACGG CGTCGTCAAG GCCGGCGCCA TTGCCACCCT GTTTTGGGGC GTGGCGGGCT TCCTCGTCGG CGTGGTGATC GCCTTCCAGC TCGCCTTCCC GGTGCTGAAC TTCGACACTG AATTTCTGAA CTTCGGCCGG CTGCGCCCGC TGCACACCTC GGCCGTGATC TTCGCTTTTG GCGGCAACGC GTTGATCGCG ACATCGTTCT ATGTCGTGCA GCGCACCTCC CGAGCCCGCC TTGCCGGCGA CGTCGCGCCG TGGTTCGTCT TCTGGGGCTA CCAGCTCTTC ATCGTCGTGG CGGCGACCGG CTACCTGATG GGCGTTACCC AGTCGAAGGA ATATGCCGAA CCGGAATGGT ATGCCGACAT CTGGCTCACC ATCGTCTGGG TCACCTACCT GTTGGTCTTC CTGGCAACGC TCGCGAAGCG CAAGGAACCG CACATCTACG TGGCGAACTG GTTCTATCTC GCTTTCATCG TGACGATCGC CATGCTGCAT ATCGGCAATA ATCTGGCGAT TCCCGAAAGC CTCACTTCGT CGAAAAGCTA TGCGCTCTTC CCCGGCGTGC AGGATGCACT GATCCAGTGG TGGTATGGGC ATAACGCGGT CGGCTTCTTC CTGACCGCGG GCTTCCTCGG CATGATGTAC TACTTCATCC CGAAGCGCGC CGAACGCCCC GTCTATTCCT ACCGGCTGTC GATCATCCAT TTCTGGTCGC TGATCTTCCT CTATATCTGG GCAGGCCCCC ACCATCTTCA CTTCACGGCG CTGCCCGACT GGGCACAGAC CCTCGGCATG ACCTTCTCCA TCATGCTGTG GATGCCCTCA TGGGGCGGCA TGATCAATGG CCTGATGACG CTGTCCGGCG CCTGGGACAA GCTCCGCACC GACCCCGTGA TCCGCATGCT CGTCGTCTCG GTCGCTTTCT ACGGCATGTC GACCTTCGAA GGCCCGGTCA TGTCGGTGAA GGCGGTGAAT TCGCTTTCGC ACTACACGGA CTGGACCATC GGTCATGTGC ATTCCGGCGC GCTCGGCTGG GTTGGCTTCG TCTCCTTCGG CGCCGTCTAC TGCCTGGTGC CGTGGCTCTG GAAGCGCGAG CGGCTCTATT CGCTCGCCCT TGTGAGCTGG CACTTCTGGA TCGCCACCAT CGGCATCGTT CTCTACATCA CCGCGATGTG GGTCTCCGGC ATCCTGCAGG GCCTGATGTG GCGCGCCTAT GACGCGCAGG GCTTCCTCGA ATACTCCTTC GCGGAAACGG TTGCCGCCAT GCATCCCTTC TATGTCATCC GGGCCCTTGG CGGCGTGCTC TTCCTCATTG GCGCGCTGAT CATGGTCTAC AACTGCTGGC GGACCATCCT CGGGCATGTC CGCGAGAGCG AACCCTTGTC CGCGACCGCG CCAACGGCGC CCGCCGGCGC AACGCTTCAA CCGGCCGAGT GA
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Protein sequence | MAVSGAPGVK LPGTMTTAAW LVAGALVAGA LLSIVVAGKA QDAPIAAHAW LFAFSFLAGA MALWQRHFSA EARGPAAIDE SAGYNDGVVK AGAIATLFWG VAGFLVGVVI AFQLAFPVLN FDTEFLNFGR LRPLHTSAVI FAFGGNALIA TSFYVVQRTS RARLAGDVAP WFVFWGYQLF IVVAATGYLM GVTQSKEYAE PEWYADIWLT IVWVTYLLVF LATLAKRKEP HIYVANWFYL AFIVTIAMLH IGNNLAIPES LTSSKSYALF PGVQDALIQW WYGHNAVGFF LTAGFLGMMY YFIPKRAERP VYSYRLSIIH FWSLIFLYIW AGPHHLHFTA LPDWAQTLGM TFSIMLWMPS WGGMINGLMT LSGAWDKLRT DPVIRMLVVS VAFYGMSTFE GPVMSVKAVN SLSHYTDWTI GHVHSGALGW VGFVSFGAVY CLVPWLWKRE RLYSLALVSW HFWIATIGIV LYITAMWVSG ILQGLMWRAY DAQGFLEYSF AETVAAMHPF YVIRALGGVL FLIGALIMVY NCWRTILGHV RESEPLSATA PTAPAGATLQ PAE
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