| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1503 |
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| Symbol | |
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| ID | 5454243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1634049 |
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| End bp | 1635122 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640877076 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001412779 |
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| Protein GI | 154251955 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.996003 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 72 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGTATC TGAACCGAAC CATGTTGCTG AGGTCATGGG CGGCGCTTGC GGCAGCGGTG
GCCGCCTATT TCATCTGGCA ATCCGTCAAC AATGAGGGGC TCGCGGAAGG CTTCGCCAGC
GGCAATGGGC GCATCGAGGC GGTGGAGATC GACATTGCCG CGAAGACGCC CGGCCGGGTG
CAGGAAATGT TCGTGGACGA AGGCGATTTC GTTACCGCCG GCGAGATACT GGTCAAGCTC
GGTACCGCCT CGCTGGAAGC GCAGCTTCGT CAGGCCGAAG CGCAGTTGCA CCAGGCGGTG
ATTGGCGTCG AAAGCGTGAA AAGCCAGGTG GAGCAGCGGC AGGCGGAAAA AGCCGCCGCC
ACGGCGGTCG TCGCGCAGCG CCGTGCCGAG CTGGACGCCG CGCAGAGCCG GCTCAACCGC
ACCGAACAAC TCACCTCCAA AGGCACGGCC TCGCGCCAGA CGCTGGATGA TGATCGCGCG
CGCTTTCAAG CGGCGAAGGC GGCGGTTAGC GCCGCCGAAG CGCAGCTCGC CGCGTCGGAT
GCGGCCATCG CCACCGCGAA GTCGCAGGTC ATCGGCGCCG AGGCGGAAGT AGAGGCCGGG
CGCGCCACGA TCGAGCGTCT CAAAGCCGAC ATAGAAGACG CCACCTTGCT CGCGCCGCGC
GACGGACGCA TCCAGTACCG GGTGACGCAG CCGGGCGAAG TCGTGGCGGC GGGCGGCAAG
GTGCTGAACA TGATCGACGT CAGCGACGTC TACATGACGT TCTTCCTGCC GACCGATGCG
GCGGGCCGCG TCGCGCTCGG CGCGGAAGTT CATCTCGTGC TCGACGCCGC GCCCCAGTAT
GTCATTCCCG CGACAGCGAC TTTCGTCGCC GACGTCGCGC AGTTCACGCC GAAGACGGTG
GAGACGCTGG ACGAGCGCGA GAAGCTCATG TTCCGCGTCA AGGCCTCCAT CGACCCCGAC
CTTCTCCGCA AGCATATCCG CAACGTGAAG ACGGGACTGC CCGGCATGGC CTATGTGCGC
CTCGATCCGC GCGTCGAATG GCCGGCCGAG TTGCAGGTCA AGCTGCCCCA ATGA
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| Protein sequence | MRYLNRTMLL RSWAALAAAV AAYFIWQSVN NEGLAEGFAS GNGRIEAVEI DIAAKTPGRV
QEMFVDEGDF VTAGEILVKL GTASLEAQLR QAEAQLHQAV IGVESVKSQV EQRQAEKAAA
TAVVAQRRAE LDAAQSRLNR TEQLTSKGTA SRQTLDDDRA RFQAAKAAVS AAEAQLAASD
AAIATAKSQV IGAEAEVEAG RATIERLKAD IEDATLLAPR DGRIQYRVTQ PGEVVAAGGK
VLNMIDVSDV YMTFFLPTDA AGRVALGAEV HLVLDAAPQY VIPATATFVA DVAQFTPKTV
ETLDEREKLM FRVKASIDPD LLRKHIRNVK TGLPGMAYVR LDPRVEWPAE LQVKLPQ
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