| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1491 |
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| Symbol | |
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| ID | 5456573 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1620390 |
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| End bp | 1622045 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640877065 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001412768 |
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| Protein GI | 154251944 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
[COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.969337 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 73 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGAAA GTCTCTGGCA TTTTCTGTCC ACCGCAGCAC CTGAAACGCT CGTTGCCACA
GATGGTAAAC GAGCGGCGAC GGCGGGGCGT ATTCGCGCAG CCGCGCGGCG TGTCACAGAG
TATCTCGGCG CAGGCGAGGC GCCTGTCGTT CTCTATTGCG AGGATGCCGC GAACTTCATC
GCAGGTTTCG CCGGCGCACT TGCCGCCGGC CGCGAAGTGC GCCTGCCCGG ACATGCCGCG
CCGGATTATC TGCGCGAAAT AGGTGCCGGC GGCGCCGCCT TCGTGAGCGA TCTGTACGGC
GTGAATGCGA TCCCGGCCTC TGTCTGCGTG CCGGATGAGG CGGACGCGGT CCTTCCGCCT
CTGCCGGATG GCCGGGTTTC TTTCTTCACC TCCGGCTCGT CCGGCGAGCC CAAGCTCTGC
ATGAAGTCGC TGCATCAACT CGCGGCGGAA GTTGAGGTGC TGCGCCGCCA ATGGGGCGCG
CCGGATGGTG CGGTCGCCGG AACCGTTTCG CACCAGCATA TATACGGAAT GCTTTTTCGC
GTTCTCTGGC CGCTCTCATC GGGGGCGCGG ATTTTTTCGC CGCAACTCGA AACATGGGAA
GCGGTGGCGG CGTGGCTGGA GCCCGGCGGC GTCATTGTAT CGAGCCCCGC CCATCTGTCG
CGGATACCCG CTGCCGTCCA TTTGCCTGTC GTACCTGCGG CGATTTTTTC CTCGGGCGGA
CCGCTTTCTC TCCAGGACGC GCAGAATGCA GGCGCGCAGT TTGGCGTTAT CCCTGTCGAG
GTGTTGGGCA GCACGGAAAC GGGGGGCGTC GCCTGGAGGC AACAAAGCGC TGCGGGTATT
CCCTGGACGC CTATGCCCGA GGTCGAGATT CGCTCCGATG ACGAAGGCGC GCTTGCGGTC
AGGTCGCCCT TCACCGGCCA TGAAGGTTTT CTCTCCATGG GGGACGCGGT TGAGATAAGT
GAGGATGGCC GTTTCGTGCT CAAGGGCCGT CTCGACCGTA TCGTGAAAGT TGAGGGCAAG
CGGGTGTCGC TGCCGCGCGT GGAGGACGTG CTGAAGTCGC AACCGGAAGT CTCGGACGCT
GCGGCTATCG ACCTCCCCGC ACGGCAGGGT GCGCTTGGCG CCGCCGTGGT GCTGACGGCC
GAGGGCGATG CTCTGCTCGC GCGTATGGGC CGTTTTCGCT TCTCCCGTCA TTTGCGCACC
GCGCTCAAAT CGCGCCTTGA ATCTATGGAG CAGCCGCGCT ACTGGCGTTT CATTTCCCGG
CTCCCCGAGA ATGCGCAGGG AAAACGTGTC GCAGCCGATC TCCGCGCGCT CTTCGTCTCG
CCTGAGCTGC CGGAAATCGA TGCGAGCGAT GTCGATGGCG ACAGTGCCCG GTTCGACCTT
CGCCTGCAGC CGGACCTCCG CTGGTTCGAA GGCCATTTCC CGGATCAGCC GATCCTTCCC
GGCGTTGCAC AGCTTCACAT CGCGGCGAAA TTTGCCGAGC GGATATGGGG CTCCGTTTTC
GATGGAAGGG AAATGTCCCG CATCAAGTTC AAACGCGTCA TGCAGCCGGA AGAGCGCATA
TCGCTGGCGC TCGAGAGAAG CGGTTCGCGC CTCGACTTCA AATACAGCAT TGACGGCGAG
GTCGTGGCGA GTGGCACGCT CAGGAGCGAT CCGTGA
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| Protein sequence | MMESLWHFLS TAAPETLVAT DGKRAATAGR IRAAARRVTE YLGAGEAPVV LYCEDAANFI
AGFAGALAAG REVRLPGHAA PDYLREIGAG GAAFVSDLYG VNAIPASVCV PDEADAVLPP
LPDGRVSFFT SGSSGEPKLC MKSLHQLAAE VEVLRRQWGA PDGAVAGTVS HQHIYGMLFR
VLWPLSSGAR IFSPQLETWE AVAAWLEPGG VIVSSPAHLS RIPAAVHLPV VPAAIFSSGG
PLSLQDAQNA GAQFGVIPVE VLGSTETGGV AWRQQSAAGI PWTPMPEVEI RSDDEGALAV
RSPFTGHEGF LSMGDAVEIS EDGRFVLKGR LDRIVKVEGK RVSLPRVEDV LKSQPEVSDA
AAIDLPARQG ALGAAVVLTA EGDALLARMG RFRFSRHLRT ALKSRLESME QPRYWRFISR
LPENAQGKRV AADLRALFVS PELPEIDASD VDGDSARFDL RLQPDLRWFE GHFPDQPILP
GVAQLHIAAK FAERIWGSVF DGREMSRIKF KRVMQPEERI SLALERSGSR LDFKYSIDGE
VVASGTLRSD P
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