| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1480 |
|---|
| Symbol | |
|---|
| ID | 5455257 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | - |
|---|
| Start bp | 1613776 |
|---|
| End bp | 1614822 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640877053 |
|---|
| Product | GTP-binding protein Obg/CgtA |
|---|
| Protein accession | YP_001412757 |
|---|
| Protein GI | 154251933 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0536] Predicted GTPase |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR02729] Obg family GTPase CgtA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 73 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTTCC TCGATCAGGC GAAAATCTAT GTCCGCTCCG GCAATGGCGG CGCCGGCTGC
GTGAGCTTCC GGCGTGAGAA GTTCATCGAG TTCGGCGGAC CGGACGGCGG CGATGGCGGC
AGGGGTGGCG ATGTCATCGT CGAATGCGTC GAGGGCCTCA ATACACTGAT CGACTACCGC
TTCCAGCAGC ATTTCAGGGC GAAAACCGGC ACGCATGGCA TGGGCAAGAA CCGCGCCGGC
GCGAACGGCG CCGATGTGGT GCTGAAGGTG CCCGTCGGAA CGCAGATTTT CGAGGAAGAC
GAGGAAACGC TGATCGCCGA CATGACGGAA GTCGGCCAGC GCATCGTGCT GCTGAAAGGC
GGCAATGGCG GGTTCGGCAA TGCCTACTTC AAGAGTTCCA CCAACCAGGC GCCCCGCCGC
GCCAACCCCG GCCTTGAAGG CCAGGAAAAG ACCATCATCC TGCGGCTGAA ACTCATTGCC
GATGCCGGGC TGGTCGGCCT GCCCAATGCC GGCAAATCGA CATTCCTGGC CGCCGTGAGC
GCCGCGAAGC CCAAGATTGC CGACTATCCC TTTACGACAC TGACCCCCGG CCTTGGCGTC
GTAACGATCG ACACCCGGAG CTTTGTGCTG GCCGACATTC CCGGCCTCAT CGAAGGCGCG
CATGAAGGTG CAGGCCTTGG CGACCGCTTT CTCGGCCATC TCGAACGCTG CAGCATCCTC
ATCCATCTGG TCGACGGCAC GGCGGAAGAC GTCGCGGAGG CCTATCACAT CATTCGAGGC
GAAATCGAAG CCTATGGCGC CGGACTGGAA GACAAGCCGG AAATTCTCTG CCTCAACAAG
ATGGATGCCT TGAGCGAGGA AGAGCGGGAA GAAAAGCTCG CGCTTCTTGC AGAAGAGAGC
GGCAGCGAGG TCCGCCTGCT TTCCGGCGTA TCGGGCGAGG GCGTGAAGGA AGTGCTCCGC
CTTGCCGCCG ACGAAATCTG GAAGACGCGC GCCATGGAAA AGGCGGAAGC TGCCACGGGT
GAGGAAGAAG AAGGCTGGAA ACCATGA
|
|---|
| Protein sequence | MKFLDQAKIY VRSGNGGAGC VSFRREKFIE FGGPDGGDGG RGGDVIVECV EGLNTLIDYR
FQQHFRAKTG THGMGKNRAG ANGADVVLKV PVGTQIFEED EETLIADMTE VGQRIVLLKG
GNGGFGNAYF KSSTNQAPRR ANPGLEGQEK TIILRLKLIA DAGLVGLPNA GKSTFLAAVS
AAKPKIADYP FTTLTPGLGV VTIDTRSFVL ADIPGLIEGA HEGAGLGDRF LGHLERCSIL
IHLVDGTAED VAEAYHIIRG EIEAYGAGLE DKPEILCLNK MDALSEEERE EKLALLAEES
GSEVRLLSGV SGEGVKEVLR LAADEIWKTR AMEKAEAATG EEEEGWKP
|
|---|
| |