| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1456 |
|---|
| Symbol | |
|---|
| ID | 5456904 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | + |
|---|
| Start bp | 1587329 |
|---|
| End bp | 1588720 |
|---|
| Gene Length | 1392 bp |
|---|
| Protein Length | 463 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640877029 |
|---|
| Product | dihydrolipoamide dehydrogenase |
|---|
| Protein accession | YP_001412733 |
|---|
| Protein GI | 154251909 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
|---|
| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 86 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGACT CATTCGACCT CGTGGTGATC GGCGCCGGGC CCGGCGGCTA TGAATGCGCA
ATCAAATCGG CGCAGCTCGG CCTCTCGGTT GCCGTGGTCG AAAAGCGCGA CCGTCTGGGC
GGCACCTGCC TCAATGTCGG CTGCATTCCC TCGAAGGCGC TGCTCCACGC ATCGGAACTG
TTCCACGAGG CGAGCGCCAG CTTCCCCGGC ATGGGCATCG AGGTCGGGAC GCCGAAGCTC
AATCTCGGCC AGATGCTCTC CTTCAAGGAC GAAGCCGTCG ACGGCAACAC CAAGGGCGTC
GAGTTCCTGT TCAAGAAGAA CAAGATCGAA TGGGTGAAGG GCGAAGGCCG CATCGAAGCC
AAGGGCAAGG TGAAGGTCGG CGACCGCGTG CTCGAAGCGA AGAACATCGT GATCGCGACC
GGCTCCGATG TCGCAAGGCT GCCGGGCATC GAGATCGACG AAAAGACGAT TGTCTCCTCC
ACAGGCGCCC TCACGCTCGA GAAGGTGCCG GGCAAACTCC TCGTCATCGG CGGCGGCGTC
ATCGGCCTTG AGCTCGGTTC CGTCTGGTCC CGCCTCGGCG CGGAAGTCAC CGTGGTCGAA
TTCCTCGACA ACATCCTTCC CGGCATGGAT GGCGAGGTCG TGAAGAATTT CACGCGCATC
CTCAAGAAGC AGGGTTTCGC CTTCAAGCTC GGCGCCAAGG TGTCGAAGGT CGAGAAGCAG
AAATCCGGCC TCAAGGTTTC GGTCGAGCCC GCCAAGGGCG GCGACGCCGA AACGCTCGAT
GCCGATGTCG TGCTCGTCTC CATCGGCCGC ACCGCCTATA CGCAAGGCCT CGGCCTCGAC
AAACTCGGCG TGAAGACGGA CAAGCGCGGC CGCGTCGAAA TCGACGCGGG CTTCAAGACC
AATGTCGACG GCATCTATGC GATCGGCGAT TGCGTCGCGG GCCCCATGCT CGCCCACAAG
GCGATGGAAG AGGGCGTGGC GCTGGCCGAG CAGCTCGCGG GCCATTACGG CGCCGTGAAT
TACGACGTCA TCCCCGGCGT CGTCTATACC TCGCCGGAAG TCGCAAGCGT CGGCAAGACG
GAAGAGCAGT TGAAGGAAGC GGGCATCGAC TATAATGCCG GCAAGTTCCC GTTCACGGCG
AATGGCCGCG CCAAGGCGAA CAAGACCACC GAAGGCTTCG TCAAGATTCT CGCCGACAAG
AAGACAGACC GCATCCTCGG CATTCACATC ATCGGCGTCG GCGCGGGCGA AATGATCGCG
CAGGCCGTCA CCGCGATGGA ATTCTCGTCA AGCTCCGAAG ACATCGCCCG CATGTGCATC
GCGCACCCGA CCATGTCGGA AGCGATCAAG GAAGCCGCGC TGGCGGTCAC GGGCCTGCCG
ATCCATATGT AA
|
|---|
| Protein sequence | MADSFDLVVI GAGPGGYECA IKSAQLGLSV AVVEKRDRLG GTCLNVGCIP SKALLHASEL
FHEASASFPG MGIEVGTPKL NLGQMLSFKD EAVDGNTKGV EFLFKKNKIE WVKGEGRIEA
KGKVKVGDRV LEAKNIVIAT GSDVARLPGI EIDEKTIVSS TGALTLEKVP GKLLVIGGGV
IGLELGSVWS RLGAEVTVVE FLDNILPGMD GEVVKNFTRI LKKQGFAFKL GAKVSKVEKQ
KSGLKVSVEP AKGGDAETLD ADVVLVSIGR TAYTQGLGLD KLGVKTDKRG RVEIDAGFKT
NVDGIYAIGD CVAGPMLAHK AMEEGVALAE QLAGHYGAVN YDVIPGVVYT SPEVASVGKT
EEQLKEAGID YNAGKFPFTA NGRAKANKTT EGFVKILADK KTDRILGIHI IGVGAGEMIA
QAVTAMEFSS SSEDIARMCI AHPTMSEAIK EAALAVTGLP IHM
|
|---|
| |