| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1451 |
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| Symbol | |
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| ID | 5456959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1579191 |
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| End bp | 1580336 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640877024 |
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| Product | ribonuclease Z |
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| Protein accession | YP_001412728 |
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| Protein GI | 154251904 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 85 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGTC TTGTTGCGAT CGGCATAGCC GGTCTGGTGG TTCTGGCAAT TGCGGCTTTC
GGCGTTCTCT GGTTTTCGCC TTCCGTTCAG GACGGGGCAA TGAAGCGCAC GGCGCTCGGC
CGGCTCGGCA GCGGCGACAA TTCGGCGCTT CTCACCGACA ATTCGCTGCA TGTGTTCTTG
TGCGGCACCG GTTCGCCGAT GCCCGATCCC ACCCGCGCCA ATGCCTGCAC GGCGGTCATC
GCCGGCGGGC ACATCGTCGT CATCGACACA GGGCCGGGCT CCTGGTCGCG CATCGTGGCG
GGCAAGCTGC CTGCGGGCAA AATCGGCACC ATCCTCTTCA CGCATCTTCA TTCCGATCAT
ATCGGCGCGC TTGGCGAGTT TGCCGTGCAG AGCTGGATCG GCGGCCGCGT CGTGCCGCTT
GAGGTTTACG GGCCGGGCAA GCTCGAAGGA AGCGTACCGC CGCTCAATTC ACTGGGCCAT
GCCTATGGCT CCTCGGGCAC GGTGGATGTG GTGCGCGGTT TTGCCGAAGC GTTCGACTCG
GATTCGGGCT ACCGCATCCT CCATCACGGC ACGGATTATC TCTCGCCTGA GGGTGCCCGG
ATCATCGGAC ACGAGATCGC CCGCCCGGCG CCGAATACGC TGGTGCCGGT ATTCGACAAG
GACGGGCTGC AGATTTCCGC CTTCCTCGTC GATCACCACC CCGTGGAGCC GGCCTTTGGC
TACCGGGTGG AGTATCAGGG CCGCGTCGCC ATCATCAGCG GCGACACCAA GCGGACGGAA
AGCGTCGAAC TGTTTTCTAA GGGCGCCGAC CTTCTCGTGC ATGAAGCCCT CAACCACAGC
ATGTCGAGCA TCATTTCCGA GGCCCTGACC GAAACCGACA ATCTGCGCCT GGCGAAAATG
GTTCACGACA CGCTCGACTA TCACGCCTCG CCGGTCGATG CCGCCGAGAT CGCGCGCGAC
GCCGGGGTGC CCATGCTGGT GCTGACGCAT ATCGTGCCGC CGCTGCCCAA TGCGCTCGCG
CGCCACATAT TCATGCGCGG CGTGGCGGAA GCGCGGGGCG ATGGCGAGAC CGTTCTGGGC
TATGACGGAC TGCTGGTCAC GCTGCCGGGG AATTCGGACA AAATCGAAAT CTCCGACCTC
ATGTGA
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| Protein sequence | MKRLVAIGIA GLVVLAIAAF GVLWFSPSVQ DGAMKRTALG RLGSGDNSAL LTDNSLHVFL
CGTGSPMPDP TRANACTAVI AGGHIVVIDT GPGSWSRIVA GKLPAGKIGT ILFTHLHSDH
IGALGEFAVQ SWIGGRVVPL EVYGPGKLEG SVPPLNSLGH AYGSSGTVDV VRGFAEAFDS
DSGYRILHHG TDYLSPEGAR IIGHEIARPA PNTLVPVFDK DGLQISAFLV DHHPVEPAFG
YRVEYQGRVA IISGDTKRTE SVELFSKGAD LLVHEALNHS MSSIISEALT ETDNLRLAKM
VHDTLDYHAS PVDAAEIARD AGVPMLVLTH IVPPLPNALA RHIFMRGVAE ARGDGETVLG
YDGLLVTLPG NSDKIEISDL M
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