Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_1446 |
Symbol | |
ID | 5455701 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 1573410 |
End bp | 1574933 |
Gene Length | 1524 bp |
Protein Length | 507 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640877019 |
Product | methylmalonate-semialdehyde dehydrogenase |
Protein accession | YP_001412723 |
Protein GI | 154251899 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.494247 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 77 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGCGC GCGATAGAAC AATGGCGAAA GACCTCACCC ATTTCATCGG CGGCAAGCAT GTCGCGGGCA CCAGCGGGCG TTTTCTGGAT GTCACAAACC CGAATACGGG TGAAGTGACC GCGCGCACGC CGCTGGCGAG CGCCGCTGAG CTTCGCGCCG CGGTCTCTGT CGCCGCGAAG GCCTTTCCCG AATGGGCCGC CACCAATCCG CAGCGCCGCG CACGCGTCAT GTTCGAGTTC AAGCGGCTCC TTGAAGCCAA TATGAACGAG CTTGCCGAAC TTCTGTCTGC GGAGCATGGC AAGGTTATCG CGGATTCGAA GGGCGACGTT CAGCGCGGCC TCGAAGTGAT CGAGTTCGCC TGCGGCATCC CGCATCTGAT GAAGGGCGAG TTCACGGAAG GTGCCGGCCC CGGCATCGAC ATGTATTCGA TGCGCCAGCC GCTCGGCGTC TGCGCCGGCA TCACGCCGTT CAACTTCCCG GCCATGATCC CGATGTGGAT GTTCGGCGTC TCCATCGCCT GCGGCAACAC CTTCATCGTC AAGCCGTCGG AGAAGGACCC TTCCGTGCCG ATCCGCCTCG CCGAACTTTT CATGGAAGCG GGCGCACCGG CTGGCGTTCT CAATGTCGTC AATGGCGACA AGGAAGCGGT CGATGCGATC CTCACCGATC CGATGATCCA GGCGGTCAGC TTCGTCGGCT CCTCCGACAT CGCGCAGTAT GTCTATGCCA CCGGCACCGC GCATGGAAAG CGCGTGCAGG CGATGGGCGG CGCGAAGAAC CACGCGATCA TCATGCCGGA TGCCGACATG GATCAGGTCG TGAACGATCT CATCGGCGCG GGCTATGGCT CTGCAGGCGA GCGCTGCATG GCGATCTCGG TCGCGGTACC TGTGGGCGAA GACACGGCGG ACCGTCTTGT CGAGAAACTC GTGCCGCGCG TCCAGTCGCT GAAGGTCGGT ATCTCGACGG CGGCGGACAG CGATTACGGC CCGCTCGTCA CCAAGGCCCA TATGGACAAG GTGAGTTCCT ATATCGAAAT GGGCGTCAAG GAAGGCGCCA AGCTCCTGGT CGATGGGCGC GGCTTCAAGC TGCAGGGCTA CGAGAACGGC TTCTTCCTCG GCGGTTCGCT GTTCGACCAT GTGACGCCGG ACATGCAGAG CTACAAGGAC GAAATCTTCG GGCCCGTGCT CCAGATCGTA CGTGCAAAGA CCTTCGACGA GGCGGCCGAA CTGCCGACCA ACCATCAATA TGGCAATGGC GTCGCGATCT TCACGCGCGA CGGCGATGCG GCGCGGAGCT TCGCGTCGCG CGTCCAGGTC GGCATGGTCG GCATCAATGT GCCGATCCCG GTGCCGCTCG CCTATCACAC TTTCGGCGGC TGGAAACGCT CTGCCTTCGG CGACACCAAC CAGCACGGCA CCGAGGGCGT GAAGTTCTGG ACCCATATCA AGACGGTGAC ATCGCGCTGG CCCACCGGCG GCGTCAAGGA GGCCTCTTCC TTCGTCATTC CGACGATGAA GTGA
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Protein sequence | MAARDRTMAK DLTHFIGGKH VAGTSGRFLD VTNPNTGEVT ARTPLASAAE LRAAVSVAAK AFPEWAATNP QRRARVMFEF KRLLEANMNE LAELLSAEHG KVIADSKGDV QRGLEVIEFA CGIPHLMKGE FTEGAGPGID MYSMRQPLGV CAGITPFNFP AMIPMWMFGV SIACGNTFIV KPSEKDPSVP IRLAELFMEA GAPAGVLNVV NGDKEAVDAI LTDPMIQAVS FVGSSDIAQY VYATGTAHGK RVQAMGGAKN HAIIMPDADM DQVVNDLIGA GYGSAGERCM AISVAVPVGE DTADRLVEKL VPRVQSLKVG ISTAADSDYG PLVTKAHMDK VSSYIEMGVK EGAKLLVDGR GFKLQGYENG FFLGGSLFDH VTPDMQSYKD EIFGPVLQIV RAKTFDEAAE LPTNHQYGNG VAIFTRDGDA ARSFASRVQV GMVGINVPIP VPLAYHTFGG WKRSAFGDTN QHGTEGVKFW THIKTVTSRW PTGGVKEASS FVIPTMK
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