| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1446 |
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| Symbol | |
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| ID | 5455701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1573410 |
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| End bp | 1574933 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640877019 |
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| Product | methylmalonate-semialdehyde dehydrogenase |
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| Protein accession | YP_001412723 |
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| Protein GI | 154251899 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.494247 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 77 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCGC GCGATAGAAC AATGGCGAAA GACCTCACCC ATTTCATCGG CGGCAAGCAT
GTCGCGGGCA CCAGCGGGCG TTTTCTGGAT GTCACAAACC CGAATACGGG TGAAGTGACC
GCGCGCACGC CGCTGGCGAG CGCCGCTGAG CTTCGCGCCG CGGTCTCTGT CGCCGCGAAG
GCCTTTCCCG AATGGGCCGC CACCAATCCG CAGCGCCGCG CACGCGTCAT GTTCGAGTTC
AAGCGGCTCC TTGAAGCCAA TATGAACGAG CTTGCCGAAC TTCTGTCTGC GGAGCATGGC
AAGGTTATCG CGGATTCGAA GGGCGACGTT CAGCGCGGCC TCGAAGTGAT CGAGTTCGCC
TGCGGCATCC CGCATCTGAT GAAGGGCGAG TTCACGGAAG GTGCCGGCCC CGGCATCGAC
ATGTATTCGA TGCGCCAGCC GCTCGGCGTC TGCGCCGGCA TCACGCCGTT CAACTTCCCG
GCCATGATCC CGATGTGGAT GTTCGGCGTC TCCATCGCCT GCGGCAACAC CTTCATCGTC
AAGCCGTCGG AGAAGGACCC TTCCGTGCCG ATCCGCCTCG CCGAACTTTT CATGGAAGCG
GGCGCACCGG CTGGCGTTCT CAATGTCGTC AATGGCGACA AGGAAGCGGT CGATGCGATC
CTCACCGATC CGATGATCCA GGCGGTCAGC TTCGTCGGCT CCTCCGACAT CGCGCAGTAT
GTCTATGCCA CCGGCACCGC GCATGGAAAG CGCGTGCAGG CGATGGGCGG CGCGAAGAAC
CACGCGATCA TCATGCCGGA TGCCGACATG GATCAGGTCG TGAACGATCT CATCGGCGCG
GGCTATGGCT CTGCAGGCGA GCGCTGCATG GCGATCTCGG TCGCGGTACC TGTGGGCGAA
GACACGGCGG ACCGTCTTGT CGAGAAACTC GTGCCGCGCG TCCAGTCGCT GAAGGTCGGT
ATCTCGACGG CGGCGGACAG CGATTACGGC CCGCTCGTCA CCAAGGCCCA TATGGACAAG
GTGAGTTCCT ATATCGAAAT GGGCGTCAAG GAAGGCGCCA AGCTCCTGGT CGATGGGCGC
GGCTTCAAGC TGCAGGGCTA CGAGAACGGC TTCTTCCTCG GCGGTTCGCT GTTCGACCAT
GTGACGCCGG ACATGCAGAG CTACAAGGAC GAAATCTTCG GGCCCGTGCT CCAGATCGTA
CGTGCAAAGA CCTTCGACGA GGCGGCCGAA CTGCCGACCA ACCATCAATA TGGCAATGGC
GTCGCGATCT TCACGCGCGA CGGCGATGCG GCGCGGAGCT TCGCGTCGCG CGTCCAGGTC
GGCATGGTCG GCATCAATGT GCCGATCCCG GTGCCGCTCG CCTATCACAC TTTCGGCGGC
TGGAAACGCT CTGCCTTCGG CGACACCAAC CAGCACGGCA CCGAGGGCGT GAAGTTCTGG
ACCCATATCA AGACGGTGAC ATCGCGCTGG CCCACCGGCG GCGTCAAGGA GGCCTCTTCC
TTCGTCATTC CGACGATGAA GTGA
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| Protein sequence | MAARDRTMAK DLTHFIGGKH VAGTSGRFLD VTNPNTGEVT ARTPLASAAE LRAAVSVAAK
AFPEWAATNP QRRARVMFEF KRLLEANMNE LAELLSAEHG KVIADSKGDV QRGLEVIEFA
CGIPHLMKGE FTEGAGPGID MYSMRQPLGV CAGITPFNFP AMIPMWMFGV SIACGNTFIV
KPSEKDPSVP IRLAELFMEA GAPAGVLNVV NGDKEAVDAI LTDPMIQAVS FVGSSDIAQY
VYATGTAHGK RVQAMGGAKN HAIIMPDADM DQVVNDLIGA GYGSAGERCM AISVAVPVGE
DTADRLVEKL VPRVQSLKVG ISTAADSDYG PLVTKAHMDK VSSYIEMGVK EGAKLLVDGR
GFKLQGYENG FFLGGSLFDH VTPDMQSYKD EIFGPVLQIV RAKTFDEAAE LPTNHQYGNG
VAIFTRDGDA ARSFASRVQV GMVGINVPIP VPLAYHTFGG WKRSAFGDTN QHGTEGVKFW
THIKTVTSRW PTGGVKEASS FVIPTMK
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