| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1423 |
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| Symbol | |
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| ID | 5454674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1553783 |
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| End bp | 1555204 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640876996 |
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| Product | 3-isopropylmalate dehydratase, large subunit |
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| Protein accession | YP_001412700 |
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| Protein GI | 154251876 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACCCC GTACCATGTA CGACAAAATC TGGGATGCCC ATCTGGTCGA GATGGCTGAG
GACGGCACGG GCCTCCTCTA TATCGACAGG CATCTGGTGC ATGAAGTGAC GAGCCCGCAG
GCCTTCGAGG GCCTGCGCAT GGCGAAGCGC CAGGTCCACG CGCCGCAGAA GACGCTCGCC
GTCGCCGACC ACAACGTGCC GACGACCGAC CGCTCCAAGG GCATCGCGGA TGAGGAAAGC
CGCATCCAGG TCGAGACGCT CGAACATAAC GCGCAGGATT TCGGCGTCGA ATATCTCCAG
ATGTCCGACA TTCGCCAGGG CATCGTGCAT ATCGTCGGGC CGGAACAGGG CTTCACGCTG
CCCGGCACCA CCATCGTCTG CGGCGACAGC CACACCTCCA CGCATGGCGC CTTCGGCGCG
CTGGCGCATG GCATCGGCAC GTCCGAGGTC GAGCATGTGC TCGCGACCCA GACGCTGATC
CAGTCCAAAG CGAAGAACAT GCGGATCAAT GTGGTCGGCA AGGCGCCCGA AGGCTTCACC
GCGAAAGACA TCGTACTCGC CATCATCGGC GAAATCGGCA CGGCGGGCGG CACCGGCTAT
GTCATCGAAT ATGCGGGCGA AGCGATCCGC GACCTTTCCA TGGAAGGCCG CATGACCGTC
TGCAACATGA CGATCGAAGG CGGCGCCCGC GCCGGCCTCA TCGCGCCGGA CGACAAGACC
TATGCCTATC TCGAAGGCCG CCCGCGCGCG CCCAAGGGTA AGGCGTGGGA AATGGCGGTC
GAGTACTGGA AGACGCTGCC TTCCGACCCC GATGCGAAGT TCGACAAGGA AATCACCATC
GACATCGCCA ACCTGCCGCC GCTCATCACC TGGGGCACGA GCCCGGAAAA CGTCATCAAG
ATCACGGATC GCATTCCCGA TCCGAAGGAC GTGGCAGACC CGTCGCATGC GAAATCGATG
CAGCGTGCGC TCGACTATAT GGGCCTCACG CCCGGCACGC CGATCAATGA AGTGAAGATC
GACCGCGTCT TCATCGGCTC CTGCACGAAC GGCCGTATCG AAGACCTGCG CGCCGCCGCC
GTCATCGCCG AAAAGGCGAT CAAGGCGGGC CGCAAGGTTG CCTCGACCGT CAATGCGATG
GTCGTGCCCG GTTCCGGCCT CGTGAAGGAG CAGGCGGAGA AGGAAGGTCT CGACAAGATA
TTCCTCGAAG CGGGCTTTGA GTGGCGCGAG CCCGGCTGCT CCATGTGCCT TGCGATGAAC
GCCGACAAGC TCGCGCCCGG TGAACGCTGT GCGTCGACAT CCAACCGCAA CTTCGAAGGC
CGCCAGGGCC GCGGCGGACG CACGCATCTC GTCTCGCCCG CCATGGCGGT CGCGGCGGCG
ATCGAAGGCC ATTTCACCGA TGTGCGCGAA TTCGGGAACT GA
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| Protein sequence | MAPRTMYDKI WDAHLVEMAE DGTGLLYIDR HLVHEVTSPQ AFEGLRMAKR QVHAPQKTLA
VADHNVPTTD RSKGIADEES RIQVETLEHN AQDFGVEYLQ MSDIRQGIVH IVGPEQGFTL
PGTTIVCGDS HTSTHGAFGA LAHGIGTSEV EHVLATQTLI QSKAKNMRIN VVGKAPEGFT
AKDIVLAIIG EIGTAGGTGY VIEYAGEAIR DLSMEGRMTV CNMTIEGGAR AGLIAPDDKT
YAYLEGRPRA PKGKAWEMAV EYWKTLPSDP DAKFDKEITI DIANLPPLIT WGTSPENVIK
ITDRIPDPKD VADPSHAKSM QRALDYMGLT PGTPINEVKI DRVFIGSCTN GRIEDLRAAA
VIAEKAIKAG RKVASTVNAM VVPGSGLVKE QAEKEGLDKI FLEAGFEWRE PGCSMCLAMN
ADKLAPGERC ASTSNRNFEG RQGRGGRTHL VSPAMAVAAA IEGHFTDVRE FGN
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