Gene Plav_1365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1365 
Symbol 
ID5455317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1498802 
End bp1499605 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content61% 
IMG OID640876937 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001412642 
Protein GI154251818 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAGAAG CCATCGATTT CGGCCGCTAC GCGCGCATTA AAGCGAGCCG CCAGGGACGC 
GTGTTGACGC TCGCCCTCAG CAACCCGAAA CTGATGAATG CCGTCGACGG CGATATGCAT
CGGGAGCTCT CCAGCATCTT CCTGGATGCA GCTGACGACA AGGACTCCGA CATCATCGTG
CTCACGGGCG AGGGTGCGGC CTTCTCTGCC GGTGGCGACC TCAACTGGAT GAAGCGAAGC
TTTGAGGCGG GCGAGAAGGG TCCGGATGCG GCGGAAGCAA AGCGCATCGT CTTCTCGCTG
CTTGACCTCG AGAAACCCAT TATTGCGAAG GTTCGCGGGC CGGCTGTCGG CCTCGGTGCT
ACCATCGCGC TCATGTGCGA CGTTATTTTC GCTGGCGAAA GCGCCCGCTT CGCCGATCCC
CATGTCCGTG CAGGCATTGT CGCGGGCGAT GGCGGCGCCA TCATCTGGCC GCAGCTTGTC
GGCTATGCGC GCGCCAAGGA ATATCTGATG ACAGGCGATG CGGTGCCAGC CAGGGAAGCC
GAGCGCATCG GTCTTATCAA TCATGTCGTG CCCGATGACG AGCTCGATGC GCGCGTCGAT
GCCTTCGCGG CGAAGCTCGC GGGTGGCGCC ATTCAGGCGA TCAAATACAG CAAGGTCTCC
GTCAATGTCG GCCTGAAGCA GCTCGCGCAT ACGATCCTCG ATACGTCGAT CGGCTATGAG
ATGCTCACCT TCACGACCGA GGACCACAAG GAAGCGGTCA ATGCTTTCCT TGAAAAACGC
GCACCCGCTT TCACGGGGCG ATGA
 
Protein sequence
MGEAIDFGRY ARIKASRQGR VLTLALSNPK LMNAVDGDMH RELSSIFLDA ADDKDSDIIV 
LTGEGAAFSA GGDLNWMKRS FEAGEKGPDA AEAKRIVFSL LDLEKPIIAK VRGPAVGLGA
TIALMCDVIF AGESARFADP HVRAGIVAGD GGAIIWPQLV GYARAKEYLM TGDAVPAREA
ERIGLINHVV PDDELDARVD AFAAKLAGGA IQAIKYSKVS VNVGLKQLAH TILDTSIGYE
MLTFTTEDHK EAVNAFLEKR APAFTGR