| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1362 |
|---|
| Symbol | |
|---|
| ID | 5456014 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | + |
|---|
| Start bp | 1494996 |
|---|
| End bp | 1495319 |
|---|
| Gene Length | 324 bp |
|---|
| Protein Length | 107 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640876934 |
|---|
| Product | excinuclease ABC subunit C |
|---|
| Protein accession | YP_001412639 |
|---|
| Protein GI | 154251815 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2827] Predicted endonuclease containing a URI domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 0.679973 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 62 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTTGCCGG GACCCAATCC ACCTCTCGGC GGACCAGTGA GCTATTTCGT TTACATCCTC
GCCAGCCGCA AGCACGGGAC ACTTTACATT GGCGTCACCA ACGACATCGC GCGCCGCGTC
TTCGAGCATC GCGAGGGCAT CGGCTCGAAG TTCACAAAGA AGTACCGCGT TCATCGGCTG
GTCTATATGG AAGCCTTCGA CGACATCCGA TATGCGATCC AGCGCGAGAA GACGATGAAG
GAGTGGCCGC GCGTCTGGAA GGTTCGCCAG ATCGAGCGCG ACAATCCCGA ATGGGACGAT
CTCACCGGCA AACTGAACCG ATAG
|
|---|
| Protein sequence | MLPGPNPPLG GPVSYFVYIL ASRKHGTLYI GVTNDIARRV FEHREGIGSK FTKKYRVHRL
VYMEAFDDIR YAIQREKTMK EWPRVWKVRQ IERDNPEWDD LTGKLNR
|
|---|
| |