| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1353 |
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| Symbol | |
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| ID | 5455110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1484759 |
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| End bp | 1485778 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640876924 |
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| Product | alpha/beta hydrolase fold |
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| Protein accession | YP_001412630 |
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| Protein GI | 154251806 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.687878 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.202512 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAAAGC GGCTTTTTGC GGGCACGCTC ACGCTTGTCG TGTTGGCGCT GGCGGTGATC
GTCATTTCGG TCCTGCGGTT CGATATCTCG CGCGAGGAGC TGGCTGGCAA ATATGCGACA
GGCGCGTCGC AATTCGTCAC GCTTCCCGGC GGCGGCAGCA TGCATGTTCG CGACGAAGGC
AATCGTGAAG GGCCGGCGCT CCTGCTCGTT CATGGTTCGA ATGCATCGCT GCATACATGG
GAGCCCTGGG TCGCCTCACT CGGCGACACC TATCGTATCG TCAGCATGGA TCTGCCCGGG
CATGGCCTGA CCGGCCGCAT CCCCGGGGAC GATTATTCCC GCGAGGGAAT GACGCAGAGC
GTCCATGAGC TGACGGAGAT ACTCGGGATC GATCGTTTTG CGATCGCGGG CAATTCGATG
GGTGGCGGCG TGGCCGCGCT TTACGCGCTC GAACATCCCG CCCAGGTCTC GGCGCTCATT
CTGGTCGACG CGGCGGGTGT TCCCGTGCCG CGCAACGATG ACGAGGTGCC GCTCGCCTTC
CGCATTGCGC GCATGCCGGT CATCAGCAAT GTCATGCGAT ATGTGCTGCC ACGCTCGCTG
GTGGAAGAAG GCGTGCGCAA GGTCTTCGTC GATCAGTCAA AGGTGACGGA CGAGATGGTG
GCGCGCTATT TCGACCTGTC GCTGCATGAA GGCAATCGCG ACGCGACGCG CATTCGGTTC
GCCAGTTATG CGGGGCGGGA CGAGGAGGCC TTCGCAGCCC GCCTCGGCGG GATCGAAATG
CCGACACTTG TCCTTTGGGG CGACAAGGAT GGTCTCATTC CCGTCTCCGC CGCGCATGAA
TTCAAGGCGC GCATACCGCA GGCGGAGCTC GCGATCTTCG AGAATGTCGG TCATGTGCCA
ATGGAGGAAG TACCGGAGGA AAGCGCCGCC GTGGTTCGGG ATTTCCTTGG CCGGGCGCTT
GCCGAAACCT CCCCGTCCGC CGGCGGAATG GCGGCGGCCG GGGTCATGGC GGAGGAATAG
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| Protein sequence | MVKRLFAGTL TLVVLALAVI VISVLRFDIS REELAGKYAT GASQFVTLPG GGSMHVRDEG
NREGPALLLV HGSNASLHTW EPWVASLGDT YRIVSMDLPG HGLTGRIPGD DYSREGMTQS
VHELTEILGI DRFAIAGNSM GGGVAALYAL EHPAQVSALI LVDAAGVPVP RNDDEVPLAF
RIARMPVISN VMRYVLPRSL VEEGVRKVFV DQSKVTDEMV ARYFDLSLHE GNRDATRIRF
ASYAGRDEEA FAARLGGIEM PTLVLWGDKD GLIPVSAAHE FKARIPQAEL AIFENVGHVP
MEEVPEESAA VVRDFLGRAL AETSPSAGGM AAAGVMAEE
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