Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_1340 |
Symbol | |
ID | 5455105 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 1474567 |
End bp | 1474917 |
Gene Length | 351 bp |
Protein Length | 116 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640876911 |
Product | Rieske (2Fe-2S) domain-containing protein |
Protein accession | YP_001412617 |
Protein GI | 154251793 |
COG category | [P] Inorganic ion transport and metabolism [R] General function prediction only |
COG ID | [COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.000041033 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGACGCGAC CGGCCCCCGG CACACCGCTT TGCCGCCTCG ACGATCTGGA CACGCCGGGC ACGAAGGGAC TGACCTTCGG GCAGGGCGCT GGCCGCTTCG AGATGTTCCT TGTACGGACG GATGACGCCC TGCGCGCCTA TGTCAATGAA TGCCCGCATG CGAACCAGCC GCTCGACAGC CGGCCCGGCC GCTTCCTCAC CCAGGACGAG AAGAGCCTGA TCTGCGGCGG CCACGCGGCG CTTTTCCGCA TCGAGGACGG GCTCTGTACG AACGGCCCTT GCGCCGGAAA AAGCCTTCAA CCCGTGCCCG TCGAGGTCGT CGATGGCGTG GTGAGAATGG CCGCAAAGTG A
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Protein sequence | MTRPAPGTPL CRLDDLDTPG TKGLTFGQGA GRFEMFLVRT DDALRAYVNE CPHANQPLDS RPGRFLTQDE KSLICGGHAA LFRIEDGLCT NGPCAGKSLQ PVPVEVVDGV VRMAAK
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