Gene Plav_1340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1340 
Symbol 
ID5455105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1474567 
End bp1474917 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content67% 
IMG OID640876911 
ProductRieske (2Fe-2S) domain-containing protein 
Protein accessionYP_001412617 
Protein GI154251793 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.000041033 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGACGCGAC CGGCCCCCGG CACACCGCTT TGCCGCCTCG ACGATCTGGA CACGCCGGGC 
ACGAAGGGAC TGACCTTCGG GCAGGGCGCT GGCCGCTTCG AGATGTTCCT TGTACGGACG
GATGACGCCC TGCGCGCCTA TGTCAATGAA TGCCCGCATG CGAACCAGCC GCTCGACAGC
CGGCCCGGCC GCTTCCTCAC CCAGGACGAG AAGAGCCTGA TCTGCGGCGG CCACGCGGCG
CTTTTCCGCA TCGAGGACGG GCTCTGTACG AACGGCCCTT GCGCCGGAAA AAGCCTTCAA
CCCGTGCCCG TCGAGGTCGT CGATGGCGTG GTGAGAATGG CCGCAAAGTG A
 
Protein sequence
MTRPAPGTPL CRLDDLDTPG TKGLTFGQGA GRFEMFLVRT DDALRAYVNE CPHANQPLDS 
RPGRFLTQDE KSLICGGHAA LFRIEDGLCT NGPCAGKSLQ PVPVEVVDGV VRMAAK