| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1303 |
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| Symbol | |
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| ID | 5455791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1438018 |
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| End bp | 1439361 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640876873 |
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| Product | ammonium transporter |
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| Protein accession | YP_001412580 |
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| Protein GI | 154251756 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0004] Ammonia permease |
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| TIGRFAM ID | [TIGR00836] ammonium transporter
[TIGR03644] probable ammonium transporter, marine subtype |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.863538 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 0.392639 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAACA CTGGAAGATA TATACGGTTG GCGGGGATGG CGGGACTCGC CACACTGGCC
TTGGCGGCTC CTGCATTCGC GCAGGAAGTC GAAGAAGTGG CCGAAGAGGC CTTTACTCTG
AGCGCACCGG AAACAGCATA TATTTTCAAT ACATTGCTGT TTCTGATCGG CGGCTTCCTC
GTTATGTGGA TGGCCGCGGG ATTCGCGATG CTGGAAGCCG GCCTCGTTCG TTCCAAGAAC
GTTGCCATGC AATGCACGAA GAACATTTCG ATTTTCTCCG TTGCGACGAT CCTCTACTAC
CTCGTCGGCT ACAACCTCAT GTATAGCGGC GTTGACGGCG GCTACTTCGG CAGCATCGCG
CTCTGGGGCG TCGATGATTC CGGTGGCGTC GCAAGCGACG GAACGGGTTA TGCGGCAGCG
TCCGACTGGT TCTTCCAGGT CGTGTTCGTT GCCACCGCCG CATCGATCGT GTCGGGCACC
CTGGCCGAGC GCATCAAGCT CTGGCCGTTC CTCCTCTTCA CCGTGTTCCT GACGGGCTTC
ATCTATCCGA TCCAGGGCTC CTGGCAGTGG GGCGGCGGCT GGCTCAGCGA ACTCGGCTTC
TCCGATTTCG CCGGTTCGAC CATCGTGCAC TCCACGGGCG GCTGGGCCGC GCTGATGGGT
GCGCTGGTTC TCGGCCCGCG CATTGGCAAG TATGTCAAGG GCGGTGGCGT GAGCCCGATG
CCCGGCTCCT CGATGCCGCT TGCAACGCTC GGCACCTTCA TCCTGTGGCT CGGCTGGTTC
GGCTTCAACG GCGCCTCCCA GCTCGCCATC GGCACGGTTG CCGACGCACA GGCTGTCTCG
ACCGTCTTCA TCAACACGAA CATGGCTGCC GCTGGCGGTG TGGTCGCGGC GATGGTCCTG
ACGCAGCTCC TCTACAAGAA GGTCGACATC ACCATGGCGC TGAACGGCGC TCTGGCCGGT
CTCGTCTCGA TCACAGCTGA GCCGCTTGCT CCGACCCTCG GTTGGGCCCT CGGTATCGGT
GCGATCGGTG GCGTGATCGT CGTCCTCACC GTTCCGCTTC TCGACAAGCT CCACATCGAC
GACGTGGTGG GCGCGATCCC CGTCCATCTC TTCTGCGGCA TCTGGGGCAC GATGGCGGTT
CCGCTGACCA ATGGAGACAC GAACTTCGCC GCACAGGCGA CGGGCGTCAT CTCCATCGGC
ATCTTCGTAG CCGTGACGAG CCTCGTGCTC TGGCTCGCGC TGCGCTTCAC GATCGGCATC
CGCTGCTCGG AAGAGGAAGA GATGATGGGA CTCGACAAGG CCGAGATCGG TGTCGAGGCC
TATCCGGAGT TCACGGTTCG CTAA
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| Protein sequence | MTNTGRYIRL AGMAGLATLA LAAPAFAQEV EEVAEEAFTL SAPETAYIFN TLLFLIGGFL
VMWMAAGFAM LEAGLVRSKN VAMQCTKNIS IFSVATILYY LVGYNLMYSG VDGGYFGSIA
LWGVDDSGGV ASDGTGYAAA SDWFFQVVFV ATAASIVSGT LAERIKLWPF LLFTVFLTGF
IYPIQGSWQW GGGWLSELGF SDFAGSTIVH STGGWAALMG ALVLGPRIGK YVKGGGVSPM
PGSSMPLATL GTFILWLGWF GFNGASQLAI GTVADAQAVS TVFINTNMAA AGGVVAAMVL
TQLLYKKVDI TMALNGALAG LVSITAEPLA PTLGWALGIG AIGGVIVVLT VPLLDKLHID
DVVGAIPVHL FCGIWGTMAV PLTNGDTNFA AQATGVISIG IFVAVTSLVL WLALRFTIGI
RCSEEEEMMG LDKAEIGVEA YPEFTVR
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