| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1302 |
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| Symbol | |
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| ID | 5456101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1436323 |
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| End bp | 1437576 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640876872 |
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| Product | Rh family protein/ammonium transporter |
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| Protein accession | YP_001412579 |
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| Protein GI | 154251755 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0004] Ammonia permease |
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| TIGRFAM ID | [TIGR00836] ammonium transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 0.356295 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCCGA TTGAAAGCGC GGGCGCTGGA TTGAGCGCCG GCGGAGACGT GTTTTTTATT
CTCATGGGCG CCATTCTTGT CTTCGCCATG CATTCCGGCT TCGCTTTTCT CGAAGTCGGC
ACCGTGCGTC ACAAGAACCA GGTCAATGCG CTTGTAAAAA TTCTCGCCGA TTTCGCTATC
TCGACGATTG CCTATTTCTT CGTCGGCTAT GCGGTGGCCT ATGGCGTCGA TTTCCTCGTC
AGCGCCGCCG AACTGAACGG AGCGACCGAA GGCTCGGAAT ACGGGCCACA AGGCCTTTCG
CTGGTGAAGT TCTTCTTCCT CCTCACCTTT GCCGCCGCGA TCCCTGCAAT CATTTCCGGC
GGCATTGCCG AGCGCGCCCG TTTCTGGCCG CAGGCAATGG CGACCGCCAT CATTGTCGGC
CTCGTCTATC CCTTCTTCGA AGGGCTGGTC TGGAATGACA ATTTAGGCAT GCAGGACATG
CTGGAGGAGA CATTCGGCGC TCCTTTCCAT GATTTCGCGG GCTCGATCGT CGTTCACGCA
GTCGGCGGCT GGCTGGCATT CGGCGCGGTC CTCATGCTCG GCCGCCGCAA TGGCCGCTAT
ACGAAAGAAG GCAAGCTTGT CGGCTTTCCC CCCTCCTCGA TCCCGTGGCT CGCGCTCGGA
TCCTGGCTTC TCTGCATGGG CTGGTTCGGT TTCAATGTGA TGTCCGCCCA ATCGCTCGAA
AGCGTTTCGG GCCTTGTCGC GCTGAATTCG CTTCTCGCCA TGGCGGGCGG CATCATCGCT
TCACTCGTCG TCGGGCGGAA CGATCCAGGC TTCATACACA ATGGCGCCCT GGCCGGCCTC
GTGGCCGTTT GCGCGGGCTC CGACCTCATG CACCCTCTCG GCTCCCTGGT CGTTGGCGCC
GTCGCGGGCG CCCTTTTTGT GGTGATGTTC GAAGCCTGCC AGCGCCGCTT CAAGATCGAC
GACGTGCTGG GCGTCTGGCC GCTTCATGGT CTTTGCGGCC TCTGGGGCGG CATTGCGGCA
GGCATCTTCG GCCTGACCGA GCTAGGTGGT CTTGGCGGGG TGAGCTTCCT CAGCCAGCTC
GTCGGCTCAT TCGCCGGCGT CGTCTATGCC GGCATCGCCG GTTTTGCCGT CTATGGCCTC
CTGAAGGCCG TTGTGGGCAT CCGGCTGAGC GCCGAGGAAG AGCACCGGGG CGCCGACCTC
TCGATCCATC AGATCGGCGC CAACCCGGAG ACCGAAGTCT CCCCGGGCCG GTAA
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| Protein sequence | MDPIESAGAG LSAGGDVFFI LMGAILVFAM HSGFAFLEVG TVRHKNQVNA LVKILADFAI
STIAYFFVGY AVAYGVDFLV SAAELNGATE GSEYGPQGLS LVKFFFLLTF AAAIPAIISG
GIAERARFWP QAMATAIIVG LVYPFFEGLV WNDNLGMQDM LEETFGAPFH DFAGSIVVHA
VGGWLAFGAV LMLGRRNGRY TKEGKLVGFP PSSIPWLALG SWLLCMGWFG FNVMSAQSLE
SVSGLVALNS LLAMAGGIIA SLVVGRNDPG FIHNGALAGL VAVCAGSDLM HPLGSLVVGA
VAGALFVVMF EACQRRFKID DVLGVWPLHG LCGLWGGIAA GIFGLTELGG LGGVSFLSQL
VGSFAGVVYA GIAGFAVYGL LKAVVGIRLS AEEEHRGADL SIHQIGANPE TEVSPGR
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