| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1301 |
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| Symbol | |
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| ID | 5456365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1434853 |
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| End bp | 1436094 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640876871 |
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| Product | aminotransferase class I and II |
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| Protein accession | YP_001412578 |
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| Protein GI | 154251754 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 0.54822 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCAA GCGCCGCTCT ATCCCGCTTT GATGGACTGC CCGGCAGCCC CTTTCCGCGC
CTGAACGCGC TGATCGAGGG AATTGAGCCC GGCCGCCCGC CGCTGGTCAT GTCTCTCGGC
GAACCGCAAC ACGCGTTTCC TTCCTTCGTG ACGGAAGAAA TTTCGCGGAA TGCCGCGCTT
TTCGGGAAAT ACCCCCCCAT CATCGGCACG GCGGCATTTC GCGATGCCGC CGCCGGCTGG
CTCGGCCGCC GTTATGGCCT CGAAGCGGCG ATCGGAAAGG GGCGCGCGCT CGACCCCAAC
GAGCAGGTCC TGCCTGTGAA CGGTACCAGG GAGGCATTGT TCAGCATCGC CCAGATCGCC
ACGCCGCCGG AGAAGGCGGG CAGGCAACCG GCAATCCTGA TGCCGAACCC GTTTTACCAG
TGTTATGCCG CTGCCGCGCT CGCGGCCGGT GCGGAGCCCG TCTATGTCGA CGCGACCCGG
GAAACGGGCT TCATGCCCGA TTTCGCGGCG CTGCCGGAAG AGCTGCTGGC GCGCACCGCG
ATGATCTATT TTTGCAGCCC CGCCAATCCG CAGGGTTCGG TGGCAAGCCT CGACTATCTG
AAGCGCCTGA TCCTGCTCGC AAGGCGATAC GCCATCACAC TCGCGATCGA CGAGTGCTAC
GCCGATATCT ATGACCGGGA GCCGCCGGCG GGCGCGCTGC AGGCGGCGAT GGCGCTTGCG
GAGGAGACAG GCGGCGGCGG CGACCCTTTC GCCAACATCA TCGTTTTTCA CTCGCTATCC
AAACGCTCGA GCCTGCCGGG GCTGCGCTCG GGCTTCTGCG CTGGCGAGCG GGCGCTGATG
CAGCGCTTTC GCAATTTCCG GAATATTGCC TGCCCGCAAG TGCCCCTGCC GCTGATGGCG
GCTTCCGCCG CCTGCTGGAA CGATGATGCA CACGCCAGCG CCAACCGCGA CCTCTACCGC
GCCAAAATCG ACGCTGCCGA GCGCGTCTTC GGCAACCGTT TCGGCTTCTA TCGCCCGGCC
GGTGGCTTCT TTCTCTGGCT CGATGTCGGC GACGGCGAAA AGGCGGCACG CGAGCTATGG
GCGAAGGCCG GCGTGAAAGT GTTGCCGGGA GCCTATCTAT CGCGCGAAGA TTCACCCTAC
GGACCCGGCG GCAATCCCGG CGCAGCCTAT ATCCGTGTGG CATTGGTCGA CGGACAGGCG
GAAACGGAAG AAGCCCTCGC CCGCATGGCG GAGGTTCTGT GA
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| Protein sequence | MTASAALSRF DGLPGSPFPR LNALIEGIEP GRPPLVMSLG EPQHAFPSFV TEEISRNAAL
FGKYPPIIGT AAFRDAAAGW LGRRYGLEAA IGKGRALDPN EQVLPVNGTR EALFSIAQIA
TPPEKAGRQP AILMPNPFYQ CYAAAALAAG AEPVYVDATR ETGFMPDFAA LPEELLARTA
MIYFCSPANP QGSVASLDYL KRLILLARRY AITLAIDECY ADIYDREPPA GALQAAMALA
EETGGGGDPF ANIIVFHSLS KRSSLPGLRS GFCAGERALM QRFRNFRNIA CPQVPLPLMA
ASAACWNDDA HASANRDLYR AKIDAAERVF GNRFGFYRPA GGFFLWLDVG DGEKAARELW
AKAGVKVLPG AYLSREDSPY GPGGNPGAAY IRVALVDGQA ETEEALARMA EVL
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