| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1298 |
|---|
| Symbol | |
|---|
| ID | 5454178 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | - |
|---|
| Start bp | 1430335 |
|---|
| End bp | 1431228 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640876868 |
|---|
| Product | peptidase C26 |
|---|
| Protein accession | YP_001412575 |
|---|
| Protein GI | 154251751 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2071] Predicted glutamine amidotransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 0.561811 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACGAA AATCACATCG GCGCCCGATT GTTGGTATCC CCTGCGACGT CAAAATGCTG
GGGCCGCACC CCTTTCATGC TGTGGGCGAG AAATACCTCG CCGCCGTTGA TGGATGCGCC
GATTGTCAGC CGATCCTCCT GCCGGTACCG CGAGAGCCCT TCAAGGAGGC GGCGGACCAG
CTCGACGAGA TTTTCGCCCT TTGCGACGGC ATATTTCTTA CCGGTTCCCA CTCGAACGTC
CATCCCGAGA ATTATGGCGG CACGCCCCCG CGCGAGGGTG TGCTCCTCGA CCGTCAGCGG
GACGCGCTGA CGCTGACGCT CATCCGGCAC TGCGTCGAAC GTGGGGTGCC GCTTTTCGCC
GTCTGCCGTG GCTTTCAGGA AATGAACGTC GCCTTCGGCG GCACGCTCCA TCAGCACATC
CATGAGGAGC CGTCGGAAGC CGGCTTTGCG CCCCGCTTCG ATCACCGGGA AAACAAGGAT
GATCCGCTCG ATGTCCAGTA TGGGCCCGCG CATGATGTGT TCCTGGAGGC GGGCGGCACT
TTCGAAAATC TGCTGGGCAC ACGGACGATT GAGGTAAACT CCCTGCACGG GCAGGGCGTG
GCGCGTCTCG CCGATGCACT GGTGGCGGAA GGCCGCGCCG CCGATGGTAC GGTGGAGGCG
ATGCGGGTGC GTGAGGCGAA GAGTTTCGCT CTCGCTGTGC AATGGCATCC CGAGTGGAAA
TATTGGGAAA ACCCGGTATC GCAGAAGCTG TTCCGGGCTT TTGGAGACGC GGTTCGCGAA
GCAGCGGCCG GGAACGCGGA AACGGAAAGA GTGGTGTCCC ATGGCGATGG GCAGCGAAGA
GAACGAGACG AAAGAGACGG TCAACAACGA GGAAGACCTG ATCAAATGGC TTAG
|
|---|
| Protein sequence | MTRKSHRRPI VGIPCDVKML GPHPFHAVGE KYLAAVDGCA DCQPILLPVP REPFKEAADQ
LDEIFALCDG IFLTGSHSNV HPENYGGTPP REGVLLDRQR DALTLTLIRH CVERGVPLFA
VCRGFQEMNV AFGGTLHQHI HEEPSEAGFA PRFDHRENKD DPLDVQYGPA HDVFLEAGGT
FENLLGTRTI EVNSLHGQGV ARLADALVAE GRAADGTVEA MRVREAKSFA LAVQWHPEWK
YWENPVSQKL FRAFGDAVRE AAAGNAETER VVSHGDGQRR ERDERDGQQR GRPDQMA
|
|---|
| |