Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_1294 |
Symbol | |
ID | 5454849 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 1425526 |
End bp | 1426332 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640876864 |
Product | exodeoxyribonuclease III Xth |
Protein accession | YP_001412571 |
Protein GI | 154251747 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0708] Exonuclease III |
TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III [TIGR00633] exodeoxyribonuclease III (xth) |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.956147 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATATCA AGATCGCGAC GTGGAATATC AACTCCGTCC GCCTGAGGAT CAATCTTGTC GAGCGCCTGA TCGCCGAGGA AAGCCCTGAT GTGCTGTGCC TGCAGGAAAT CAAGTGCATC AACGATGCCT TTCCCCTGAA GGCATTGAAG GCTGCGGGAT ATGAACACAT CGCGGTGCAT GGACAGAAGG GATATCATGG TGTCGCGACG CTGAGCCGCA TCCCCTTCAA GAAGGTCGAC AGCATGAATT TCTGCGAGAA AGGCGATTGC CGCCATCTCG CAACCGACCT CGACATGCCG GGTGGTATGC GGGTCCATAA CTTCTATGTG CCGGCCGGCG GCGACGAGCC GGACCCGGAG ATCAACCCGA AATTCGCTCA CAAGCTGGCA TTCGTGCGGG AAATGACGAG GCTCTATGAT GGGCACCGCA CGAAATCACA AAACCGGATG GTACTGGTCG GCGACCTGAA TATTGCGCCG CTTGAACACG ACGTCTGGTC GCACAAGCAG CTTCTCAAGG TTGTGAGCCA TACGCCCGTG GAAGTCGCGC TTATGAACGA ACTGATAGCC TCCCACGACT GGGTGGACGT GATGCGCCGT TTTGTGCCCG ATAACGAGAA GCTTTATTCC TGGTGGAGCT ACCGCGCGAA GGACTGGCTG GCTGCCGATC GCGGGCGCCG CCTCGACCAC ATATGGGTGA CACCGGCACT TGCCGACACG CCGGTATCTA TGACTGTACG CAAGGACGCG AGGGGGTGGG AGCGGGCGTC GGACCATGCG CCGGTAGTCG CGACGCTGAG GCTCTAG
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Protein sequence | MDIKIATWNI NSVRLRINLV ERLIAEESPD VLCLQEIKCI NDAFPLKALK AAGYEHIAVH GQKGYHGVAT LSRIPFKKVD SMNFCEKGDC RHLATDLDMP GGMRVHNFYV PAGGDEPDPE INPKFAHKLA FVREMTRLYD GHRTKSQNRM VLVGDLNIAP LEHDVWSHKQ LLKVVSHTPV EVALMNELIA SHDWVDVMRR FVPDNEKLYS WWSYRAKDWL AADRGRRLDH IWVTPALADT PVSMTVRKDA RGWERASDHA PVVATLRL
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