| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1293 |
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| Symbol | |
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| ID | 5455183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1424649 |
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| End bp | 1425290 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640876863 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001412570 |
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| Protein GI | 154251746 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.313328 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACAC CAAAGACCGC AGCGCCCAAA ACCAGAGACA GGATACTTGC CACGAGCCTG
AAGCTCTTTA ATGAGAACGG CTACGACGCC GTGACCACGG CCCGTATCTC CGACGAGGTG
GGCATATCGG AAGGCAACCT CTGGTATCAC TTCCGCACCA AACGCGACCT CGTGCGCGCC
CATCAGCTGG CGCTCTTCAT CCTTATCGAC AAGCGGCTTT CCATCCAGTC GACGCCCACG
ACGGTGCTGG ACAGCTACGC GCAGTTCAAC CGGATGGTGT TCGAGGAGGT CTGGACCTAC
CAGTATCTCT ACCGCGACCA GGCGGAATAT GGCCGAACCT CACCGGAACT TGAGGACAGG
GTGCATCGCA TCTACGACAC CACAACGACA ATGCTGATCC GTTTTTTCCG CCACATGATT
GACGTGGGTC ACCTGGATAT GCCCGACGAC GAGTTGGCGC CGCTCGCGGA CAACACCTGG
ATGGTGATTC GCTATTGGCC CAGCTTTCTG CGCGAAACGC GCCGCGTCGT GAAGCTGGAC
AAGGCGGCGC TCAATGCCGG CATCCGCCAC CATTTCGCGC TCTTCGAAAC GCACTTGTCG
CCAAAGGCGC GCGCCTATTT CGAAAAGACG GCTTACGCCT GA
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| Protein sequence | MATPKTAAPK TRDRILATSL KLFNENGYDA VTTARISDEV GISEGNLWYH FRTKRDLVRA
HQLALFILID KRLSIQSTPT TVLDSYAQFN RMVFEEVWTY QYLYRDQAEY GRTSPELEDR
VHRIYDTTTT MLIRFFRHMI DVGHLDMPDD ELAPLADNTW MVIRYWPSFL RETRRVVKLD
KAALNAGIRH HFALFETHLS PKARAYFEKT AYA
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