| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1291 |
|---|
| Symbol | |
|---|
| ID | 5455474 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | + |
|---|
| Start bp | 1423692 |
|---|
| End bp | 1424186 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640876861 |
|---|
| Product | cyclic nucleotide-binding protein |
|---|
| Protein accession | YP_001412568 |
|---|
| Protein GI | 154251744 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.234039 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 57 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTTG AACCAGCCGT CGCCCTGTTG CAGCGTCTCG ACCTTTTTGC CGGTCTCGAT
ACCGTGCGTC TGGAGGTCGT CGCATTCACC TGCGAGCGCC GGGACTATGC GCCGGGTGCC
AGGGTTTTCG ACGCCGGAGA TGAAGCCGAT TGCGCATATC TCATTATCGA GGGAGAGGCC
GTCATGCTTG TGCATGACGA TGGTGAGGGG CGAAATGCAC TTCGGCTCGA CAGCGGAGAC
CTCATCGGCG AAACGGCGCT TTTTGGGCCG GAACTGAGGA GGACGAGCGT CCGCGCGGTG
ACTTCGCTCT CCACGCTTCG GATTGGCCGC GATATGTTTC AGCGTCTTCT TGGTGAATTT
CCGGAAATGG CGGGATCGGT TGCGGCGCGT GTTGCGGACA GGCTCGATGT GGTAAGCGAA
GAGCTTCGGG TATTGGCGAG CCGGTTTTCC AAGGCAGACC GCGGCGTAAA AAAGAGCAGG
GTGCGAGATG AGTGA
|
|---|
| Protein sequence | MSLEPAVALL QRLDLFAGLD TVRLEVVAFT CERRDYAPGA RVFDAGDEAD CAYLIIEGEA
VMLVHDDGEG RNALRLDSGD LIGETALFGP ELRRTSVRAV TSLSTLRIGR DMFQRLLGEF
PEMAGSVAAR VADRLDVVSE ELRVLASRFS KADRGVKKSR VRDE
|
|---|
| |