| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1285 |
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| Symbol | |
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| ID | 5455970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1418249 |
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| End bp | 1418941 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640876855 |
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| Product | alanine racemase domain-containing protein |
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| Protein accession | YP_001412562 |
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| Protein GI | 154251738 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
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| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCAGCA CCAATACCGA TCCTGCCACA GTATCGCCTG CCTCTCGCCT TGAGGCCATA
CGCGCGCGCA TTTCCGCCGC AGCGCGCGAT GCCGGCCGCC GGGCGGAAGA GATCAGTTTG
ATAGCGGTAT CGAAGACATT CGAGGCGGAT GCCATCGCGC CTCTGCTCGA TGCCGGGCAG
CGGTGCTTCG GCGAAAATCG CGTTCAGGAA GCGGCGGGCA AGTGGCCACA CCTTCGCGAG
CGCTACAGCG GCATAGAGTT ACATCTCATC GGGCCGCTTC AGAGCAACAA GCTCAATGAC
GCACTCGATC TTTTTGACGT CCTCCATACG CTTGACCGGG CGAAGCTGGC CGAAGCGCTG
GTGAAGGCAC GGGACGCCGG GAAGAGGCTT CCCCGATTGT TCTTGCAGGT CAATACGGGC
GAAGAGCCAC AGAAGGCCGG GGTACCGCCG GGTGATGTGG ATCGATTTCT CGAGCGATGC
CGTAACGACT GGAAGCTGGA GATCGAGGGG TTGATGTGCA TTCCTCCCGT CACGGAAGAA
CCGGCGCTGC ATTTCGCGCT GCTTGAAAAA ATTGCACGGC GAAATGGTCT CTCCAAGCTT
TCGATGGGCA TGAGTGCGGA TTTTGAAACG GCCATACGGC TCGGCGCCAC GCATGTCCGC
GTCGGCAGCG CGTTGTTCGG CACGCGCGGC TAG
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| Protein sequence | MTSTNTDPAT VSPASRLEAI RARISAAARD AGRRAEEISL IAVSKTFEAD AIAPLLDAGQ
RCFGENRVQE AAGKWPHLRE RYSGIELHLI GPLQSNKLND ALDLFDVLHT LDRAKLAEAL
VKARDAGKRL PRLFLQVNTG EEPQKAGVPP GDVDRFLERC RNDWKLEIEG LMCIPPVTEE
PALHFALLEK IARRNGLSKL SMGMSADFET AIRLGATHVR VGSALFGTRG
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