| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1274 |
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| Symbol | |
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| ID | 5455465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1404879 |
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| End bp | 1406735 |
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| Gene Length | 1857 bp |
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| Protein Length | 618 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640876844 |
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| Product | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA |
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| Protein accession | YP_001412551 |
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| Protein GI | 154251727 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division |
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| TIGRFAM ID | [TIGR00136] glucose-inhibited division protein A |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.574181 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCGCG ACTTCGATGT GATCGTGATC GGTGGCGGCC ATGCGGGCTG CGAGGCGGCC
TCGGCTGCGG CGCGGGCCGG TGCGCGCACC GCGCTCATCA CGCACAAGCT GGCGACCATC
GGCGAGATGT CCTGCAACCC GGCCATTGGC GGTCTCGGCA AGGGTCATCT GGTGCGGGAG
GTCGATGCGC TGGACGGGCT GATGGGCCGG GTCGCCGATC AGGCCGGCAT CCAGTTCCGC
CTGCTCAACC GGCGCAAGGG TCCTGCCGTT CGCGGCCCCC GCGCCCAGGC CGACCGCAAG
CTCTATCGTG CCGCCATGCA GGAGGCGATC CTCAACCACC GCAATCTCGA AGTGATTGAG
GGCGGCGTCT CCGATCTCAT CGTCGAGGAC GGCCATGTCG CCGGTGTGAT CGCGGAAGAT
GGCCGCCAGT TCCGCGCCCG CCGCGTGGTC CTCACCACCG GCACTTTCCT GCGCGGAGTG
ATTCATCTTG GCACACAGCG CATCCCGGCG GGCCGGGTGG GGGAAGCCCC TGCGCTCGGC
CTGTCCGACC GGCTCTACGG TCTCGGCTTC CAGCTCGGAC GCTTGAAGAC CGGGACGCCG
CCGCGCCTCG CGGGCGACAG TATCGATTGG TCCTCGCTGG AGGTTCAGCC GGGCGACGAC
CCGCCGGTGC CCTTCTCCTT CCTCACCACG GAAATCACGA CGCCGCAGGT GCCCTGCCAC
ATCACCCGCA CCACGGCGGA AGGTCACCGG ATCATCGAGG ACAATCTTCA TGTCTCGCCG
GTCTATTCCG GCCAGATCGA AGGCGTCGGT CCGCGCTATT GCCCCTCCAT CGAGGACAAG
GTGGTCCGGT TCAGGGAGCG CGACAGTCAC CAGATCTTTC TTGAGCCGGA AGGGCTGGAC
GACGACACGA TCTATCCGAA CGGGATTTCG ACGGCGCTGC CGGAAGAGGT GCAGCTTGCC
TTCCTCAAGA CCATTCCCGG TCTCGAGAAT GTCGTCATGC GCCGCGCCGG TTATGCCATC
GAGTATGACT ATATCGACCC GCGCGAGCTG CGCCCGACTT TGGAGACGAA GCGGCTGGGC
GGTCTTTACC TGGCGGGCCA GATCAACGGC ACCACGGGTT ACGAGGAAGC CGCCGCACAG
GGGCTGATCG CAGGGCTTAA CGCGGCCCTG GCGGAGCGGG GCGCCGAGCC CTTTATCCTC
GACAGGGCGC AGGCCTATAT GGGTGTGATG GTGGATGATC TCATCACGCG CGGCGTCAGC
GAGCCCTATC GCATGTTCAC CTCGCGAGCC GAATACCGGC TGACGCTCCG GGCCGACAAT
GCCGACCAGC GGTTGACTGC GGCGGGCATC GGCGCGGGCG TGGTGGGGGA GAGGCGGGTC
ATGGCCTATG AGGCCAAGGC GAGGGCGCTG GAGGCCGCGC GGGTACTTTG CGATGGTCTG
AGGCTCAGCC CGACGGAGCT CGCCAGGCGC GGTCTCAAGG TCAATCAGGA TGGGGTGGCC
CGCACGGCCA TGGATTTGCT TGCCTACCCG GATATCGATG CCGGGGTATT GGCGGGCGTC
TGGCCGGAAC TCGCCGCCCT TGAGCCTCAT ATCGCCGAGC AGATGGGTAT CGAGGCCCAA
TATGCCGGTT ATCTCGACCG GCAGGACGCC GACATCAAGG CGTTCCGGAG GGATGAGGGT
TTGCGGCTAC CGGCTGAGAT CGATTATGCC TCGGTGCTCG GCCTTTCCCA TGAGGTCCGG
CAGAAGCTCG CCAAGGCTCG GCCGGCCACG CTAGGGCAGG CGGCGAGGGT GGATGGGGTT
ACACCGGCAG CCCTCACGAC CCTAATGATT CACGTGAAAC AAAAGCGCAG TGCTTGA
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| Protein sequence | MTRDFDVIVI GGGHAGCEAA SAAARAGART ALITHKLATI GEMSCNPAIG GLGKGHLVRE
VDALDGLMGR VADQAGIQFR LLNRRKGPAV RGPRAQADRK LYRAAMQEAI LNHRNLEVIE
GGVSDLIVED GHVAGVIAED GRQFRARRVV LTTGTFLRGV IHLGTQRIPA GRVGEAPALG
LSDRLYGLGF QLGRLKTGTP PRLAGDSIDW SSLEVQPGDD PPVPFSFLTT EITTPQVPCH
ITRTTAEGHR IIEDNLHVSP VYSGQIEGVG PRYCPSIEDK VVRFRERDSH QIFLEPEGLD
DDTIYPNGIS TALPEEVQLA FLKTIPGLEN VVMRRAGYAI EYDYIDPREL RPTLETKRLG
GLYLAGQING TTGYEEAAAQ GLIAGLNAAL AERGAEPFIL DRAQAYMGVM VDDLITRGVS
EPYRMFTSRA EYRLTLRADN ADQRLTAAGI GAGVVGERRV MAYEAKARAL EAARVLCDGL
RLSPTELARR GLKVNQDGVA RTAMDLLAYP DIDAGVLAGV WPELAALEPH IAEQMGIEAQ
YAGYLDRQDA DIKAFRRDEG LRLPAEIDYA SVLGLSHEVR QKLAKARPAT LGQAARVDGV
TPAALTTLMI HVKQKRSA
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