| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1260 |
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| Symbol | rho |
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| ID | 5454245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1391664 |
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| End bp | 1392932 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640876830 |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_001412537 |
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| Protein GI | 154251713 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACGC AGATCAAGCT GCAGGACCTC AAGGCAAAAT CGCCGACCGA ACTTCTGGCG
ATTGCCGAGG AACTCGAGGT CGAGAACGCC TCGACGCTCA GGACGCAGGA CATGATGTTC
GCGATCCTGA AGCAGTATGC GGAACAGAAT ATCGACATCA TCGGCGAAGG CGTGGTCGAG
GTGCTGCCGG ACGGCTTCGG CTTCCTGCGC TCTCCCGAAG CCAACTACCT GCCGGGTCCC
GACGATATTT ACGTCTCGCC CTCGCAGATC CGCCGCTTCT CGCTCCGTAC CGGCGACACG
GTCGAAGGCG AGATCAGGAG CCCGAAGGAT GGCGAGCGGT ATTTCGCGCT CCTCAAGGTC
TCGACGGTCA ATTTCGAGAG CCCCGACAAG GCCCGCCACA AGGTCCATTT CGACAATCTG
ACGCCGCTCT ATCCCGACGA GAAGCTCGAG ATGGAAGTCG CCGATCCGAC GCTGAAGGAC
CGCTCCTCGC GGCTCATCGA CATCGTCGCG CCGCTCGGCA AGGGCCAGCG CGGGCTGATC
GTCGCGCCGC CGCGCACGGG CAAGACCGTT CTCCTCCAGA ACATCGCGCA TTCGATCACG
ACCAACCACC CGGAATGCTA TCTGATCGTG CTGCTGATCG ACGAGCGGCC GGAAGAAGTG
ACCGACATGC AGCGTTCGGT GAAGGGCGAG GTCATCTCGT CCACCTTCGA CGAGCCGGCG
ACGCGCCACG TCCAGGTCGC CGAAATGGTG ATCGAGAAGG CAAAGCGCCT CGTCGAACAC
GGACGCGACG TCGTTATCCT GCTCGACTCG ATCACGCGTC TCGGCCGCGC CTACAACACG
GTCGTCCCGT CCTCCGGCAA GGTGCTGACC GGCGGTGTCG ACGCGAACGC GCTGCAGCGC
CCCAAGCGTT TCTTCGGCGC CGCGCGCAAT ATCGAGGAAG GCGGCTCGCT CACCATCATC
GCGACCGCGC TCATCGATAC CGGCAGCCGC ATGGACGAAG TCATCTTCGA AGAATTCAAG
GGCACCGGTA ACTCGGAAAT CGTCCTCGAC CGCAAGATCG CCGACAAGCG CGTCTTCCCG
GCGATGGACA TCCTCAAATC CGGCACCCGC AAGGAAGAGC TGCTGGTCGA CAAGGGCACG
CTCTCGAAAA TGTATGTGCT CCGCCGCATC CTCAACCCGA TGGGCACCGT CGACGCGGTC
GAATTCCTTC TCGACAAGCT CAAGCAGACG AAGAGCAACG GCGAATTCTT CGACTCGATG
AATACCTGA
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| Protein sequence | MTTQIKLQDL KAKSPTELLA IAEELEVENA STLRTQDMMF AILKQYAEQN IDIIGEGVVE
VLPDGFGFLR SPEANYLPGP DDIYVSPSQI RRFSLRTGDT VEGEIRSPKD GERYFALLKV
STVNFESPDK ARHKVHFDNL TPLYPDEKLE MEVADPTLKD RSSRLIDIVA PLGKGQRGLI
VAPPRTGKTV LLQNIAHSIT TNHPECYLIV LLIDERPEEV TDMQRSVKGE VISSTFDEPA
TRHVQVAEMV IEKAKRLVEH GRDVVILLDS ITRLGRAYNT VVPSSGKVLT GGVDANALQR
PKRFFGAARN IEEGGSLTII ATALIDTGSR MDEVIFEEFK GTGNSEIVLD RKIADKRVFP
AMDILKSGTR KEELLVDKGT LSKMYVLRRI LNPMGTVDAV EFLLDKLKQT KSNGEFFDSM
NT
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