| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1185 |
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| Symbol | |
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| ID | 5454038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1322551 |
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| End bp | 1323735 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640876756 |
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| Product | conjugation TrbI family protein |
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| Protein accession | YP_001412463 |
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| Protein GI | 154251639 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2948] Type IV secretory pathway, VirB10 components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACA TTGACCACGA CAACGCCGAA CGGCTGGACC AATCAACGCC CGCCGTCGAT
GCATCATCGT CCATGCGCCT GCGGGCAGAA CCTCCGCGCG TCACCCGGCT GTCGCGCAAA
GTGCTCGCCG GCGTCGCTGC GGTTGCACTC GTCAGCATCG GCGGCTCTCT CATCTACGCG
CTCCAGACCC GCGATCCCGG CAAGAGCGCC GACGAACTCT ATTCAACCGA CAACCGCACC
ACGGCCGACG GCCTGGCCGG CCTGCCACGC GATTACACCG GCCCGGTCCT CGGCCCGGCG
CTGCCTGGAG ACCTCGGCCG CCCGATCGTC AGCGCGCAAA ATCAGGGGCA TCCTGTCGTG
CCGCCCGCCA TGGCGGCGCC GGGGCCTGAT CCCGAGGAGC AACGTCGCCT AGCCGAATTG
GAGGCCGCCC GCACCAGCCG CGTGTTTTTC CAGGCCGGTC CGGCCGCAAC GTCGGCGACC
GCCGGCACGA ATGTCCCGGG ATTTCCCAGC GTGGGAACCG GCACACAACC TGGTGCCGAG
ACCGCTCAAG ATCGACAACT CGCGTTCCTC AATGCTCCCG TCGACCGCCG TACCATTGCG
GCCGACCGCA TCATGGCACC AGCATCGCCC TATGTTCTCC AGGCGGGCGC GGTCATCTCC
GCCGCCCTCA TCACCGGCAT CCGCTCCGAT CTGCCTGGAC AAATCACCGC GCAGGTGACG
GAGAACATCT ACGATAGTCC GACGGGGCGC ATCCTCGTCA TCCCACAGGG CACGCGGATC
ATCGGCCAGT ACGACAATAG CGTCCAATAC GGGCAGAGCC GCGTGCTTCT CGTCTGGAAC
AGGCTCATTC TCCCGAACGG CCGGTCCATT GTGCTCGAAC GACAACCCGG AGCCGATACC
CAGGGCTATG CCGGTCTGGA AGACGGCGTC GATTACCATT GGTGGGATCT CGCCAAAGCG
GCGGGGCTCT CGACGCTCCT GTCAGTCGGG TCCGAGCTTG CCATCGATGA TCAGGACCGG
CTCCTGCGCG CCATCCGCAA TGGGGGCCAG GACACGATCA ATGATGCCGG TCAGCAGATC
GTTCGGCGCC AGCTCAACGT CGCGCCGACA CTGACGATCC GGCCCGGCTT CCCTGTCCGC
GTGATCGTCA CCCGCGATCT CGTCCTCGAA CCTTACGGAG GCTGA
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| Protein sequence | MSDIDHDNAE RLDQSTPAVD ASSSMRLRAE PPRVTRLSRK VLAGVAAVAL VSIGGSLIYA
LQTRDPGKSA DELYSTDNRT TADGLAGLPR DYTGPVLGPA LPGDLGRPIV SAQNQGHPVV
PPAMAAPGPD PEEQRRLAEL EAARTSRVFF QAGPAATSAT AGTNVPGFPS VGTGTQPGAE
TAQDRQLAFL NAPVDRRTIA ADRIMAPASP YVLQAGAVIS AALITGIRSD LPGQITAQVT
ENIYDSPTGR ILVIPQGTRI IGQYDNSVQY GQSRVLLVWN RLILPNGRSI VLERQPGADT
QGYAGLEDGV DYHWWDLAKA AGLSTLLSVG SELAIDDQDR LLRAIRNGGQ DTINDAGQQI
VRRQLNVAPT LTIRPGFPVR VIVTRDLVLE PYGG
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