| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1162 |
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| Symbol | |
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| ID | 5455007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1289978 |
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| End bp | 1290421 |
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| Gene Length | 444 bp |
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| Protein Length | 147 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640876732 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_001412440 |
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| Protein GI | 154251616 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTATCTGA TCTTTGTGAT GATTGGCATC CTGCTTTACG CCTCCATCTC CCGAACCATG
TTCAACATGC CCATCAGCTG GGCGATGGAG ATGGGGCAGT TTCTCCTGGC TGCCTATTAC
TTGCTCGGCG GTGGTTACTC CCTCCAGATC AATTCGCATG TGCGGATGGA CCTGCTCTAT
GGCCGTCTCT CGCCACGGAA AATGGCATTC ACCGACACGA TCACCGCCTT CTTTCTGATT
TTCTACCTGT GCGTTCTGCT CTATGGCGGC ATTTCCAGTA CCGCGTATGC GGTCACATAT
CAGCAGGTGA ACTATACATC CTGGGCGCCC TTGCTTTGGC CGATCAAGAG CATCATGACG
GTAGGCATTG CGCTGATGCT GCTTCAGGCC ATAGCTATTT TCTTCAGAGA TCTCGCCCGC
GTCCGAGGTG AGGAAATCGC ATGA
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| Protein sequence | MYLIFVMIGI LLYASISRTM FNMPISWAME MGQFLLAAYY LLGGGYSLQI NSHVRMDLLY
GRLSPRKMAF TDTITAFFLI FYLCVLLYGG ISSTAYAVTY QQVNYTSWAP LLWPIKSIMT
VGIALMLLQA IAIFFRDLAR VRGEEIA
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