Gene Plav_1132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1132 
Symbol 
ID5456491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1248180 
End bp1249136 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content66% 
IMG OID640876702 
Producthypothetical protein 
Protein accessionYP_001412410 
Protein GI154251586 
COG category[S] Function unknown 
COG ID[COG1262] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGCT GGCTCCTGGC CGCCCTGTTT ATCCTCGCCG CCGCCGCCGT TCTGGCGGCG 
GCGTTCGTGT GGCTGCGTGG CGGCCGGGAA GCGGCACGGC TTTCTTCGAC GGAGCCGTCG
CAATGCCTTT CGCCCATCGC CGGTGAAACG CCGCACCCGG GCATGGTCCG CGTCGAAGGC
GGCACTTTCA TGATGGGCGA TACGCTCTAC CCGGAAGAGG GGCCGCTGCG CGAGGTCTCG
GTCGAAGCCT TTTGGATGGA CCGTACGGAG GTCACCAATG CCGAGTTTGC CGAATTCGTT
GCCGCCACGG GCTATGTCAC GGTGGCCGAG CGTCCGGTCG ACACCGCTCG TCACCCCGGC
CTCCCGCCCG AGATGCAAAA GCCCGGCGCC GTCGTCTTCG TCATGCCGAA TGATGTGAGC
GGCACCGGCG ACATCTCGCA ATGGTGGCAA TACATTCCCG GCGCGAATTG GCGCCACCCC
GGCGGTCCCG ACACGTCGAT AGAGGAACGC GACCATTTTC CCGTCACCGC TATCGCCTAT
GAAGATGCGC AGGCTTACGC GGCGTGGAAG GGAAGGGTGC TCCCGACGGA AGCACAATGG
GAGTGGGCCG CCCGCGAAGC GAAAGCGGAC GCGCCGCCGC CCCGTGCGCA GCCGCGCGAG
GCAAACACCT GGCAAGGCCT CTTCCCCGTC GCCAACAACA CGGAGGACGG CTTCGTCGGC
ATTGCACCCG TCGGTTGTTT CGAGCCGAAC GCGCTCGGCC TCTACGATAT GATAGGCAAT
CTCTGGGAAT GGACGGTCGA TGAGTATGAA ACCGTCCCCG GCGCACGCGT CATCAAGGGT
GGTTCCTGGC TCTGCGCGCC GAATTATTGC CTGAGATACA GGCCCGGCGC GCGCCAGCCG
CAAGAAGCCG ACCTCGCCAC CACGCATCTC GGTTTCCGAA CGGTCCTCGC GCCCTGA
 
Protein sequence
MKRWLLAALF ILAAAAVLAA AFVWLRGGRE AARLSSTEPS QCLSPIAGET PHPGMVRVEG 
GTFMMGDTLY PEEGPLREVS VEAFWMDRTE VTNAEFAEFV AATGYVTVAE RPVDTARHPG
LPPEMQKPGA VVFVMPNDVS GTGDISQWWQ YIPGANWRHP GGPDTSIEER DHFPVTAIAY
EDAQAYAAWK GRVLPTEAQW EWAAREAKAD APPPRAQPRE ANTWQGLFPV ANNTEDGFVG
IAPVGCFEPN ALGLYDMIGN LWEWTVDEYE TVPGARVIKG GSWLCAPNYC LRYRPGARQP
QEADLATTHL GFRTVLAP