| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1119 |
|---|
| Symbol | |
|---|
| ID | 5455439 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | - |
|---|
| Start bp | 1232011 |
|---|
| End bp | 1233519 |
|---|
| Gene Length | 1509 bp |
|---|
| Protein Length | 502 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640876689 |
|---|
| Product | integral membrane sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_001412397 |
|---|
| Protein GI | 154251573 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.092302 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 65 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGAAG TGAAATATCT GGCCGAAGGT TCGAGCGGGC CTGAGCGGCA TGGGAGCGGA
GCGCGCACTG CACGGCACGA TTCCGTCGAT CATGTATCGG CCGAGCTATC GACCGATTAT
GCACTCGATC CGATAACCTT GCGGTTTCGC CAGGCGGATG TCGAGCATCG GTACAATGTT
CAGAATTACG AGCGTCATAT CGGGTTGACG CGTCTTTCGA TTGCGCTCGG CGCCGTGATT
TTCGCGCTGT ACGCTGTTTT CGATCCCTAC ATCATTCCGG AAGTCGCCAC CGAGGCGTGG
GCAATCCGCA TTGGAATTGC CTGTCCGTTA TTGCTCGCCA TCGTCGCCAT TTCCTATCTG
CCCGGCTTTT CGTACCGGCA TCAGGCCTTG TTGTCGCTGG CAATGGCCAT TCCTGCTCTT
GCCGTCGTTG CCATGATTGC GATCGCGGCC GCGCCGGGCA ATTACCTCTA CTACGCCGGC
GTTCTCATCA TTCTCAGCTA TGTGAACTGC CTCTGGCGGC TACGCTACTA CTACTCGATC
CTGATGTCGG TTCTGGCGTG TGCCGCATAT GAATATGCGG TTCTGTTCGT CAATCCCATT
CCGACAAACA TGCTTATCAA CAATAACGTC TTTCTGATTT TCGGCGTGGG TGTCAGCATG
TTTGTGAACT ACGTGCAGGA GTATCATCTG CGCCGGAGCT TCATCGACAA TGAGAAGCTG
CGCTCTGAAC AACGGCGTTC GGAGCGGCTC CTGAGCCGTT CGGAAGCCGC CAACCGTGCC
AAGAACGACT TCCTCGCCAT CATGAGCCAT GAGTTGCGCA CGCCACTCAA CGCCATCATC
GGCTTTTCCG AAATCATCTC GAACCAGATG TTCGGACCTG TCGGACAGCC TAAATATGTC
GATTATGCAG CTGACATCCG GTCGAGCGGT GCCCATCTTC TGAGTATCAT CAACGACATC
CTCGATATCT CGAAGGCCGA AGCGGGAAAG CTGCAACTGG AAGAAGAGCC GATCGACCCG
GTCGAAGCGC TGAACAGCAC AATGCGCATG TTCCGCCAAC GGGCATCCGA GCTGGGTGTC
GAGCTCAGCT TCCGCGTGCG CGACGATATC CCGTGGATCA TTGCCGACCC ACGTCTGTTC
AATCAGGTCG CGATCAACTT GACCTCAAAT GCTCTGAAAT TCACGCCCGA GAATGGCGAG
GTGTCGGTGG AGCTTGGCTT GAATCCCGCC GGAGATATGG TGCTCGCCGT GAGGGACACC
GGCATCGGCA TCAAGGCAGC GGATACGACA CGCATTTTCG AACCATTCGT CCAGGTCGAA
GATGCGATGT CCCGGACGCA ACAAGGCACC GGCCTCGGAC TACCGCTCGT TCGCAAGATC
ATGAACCTGC ATGGCGGTTC GATAGAACTC GAAAGCGTCG TGGACGAAGG CACAATAGCA
CGCGCCACCT TCCCGAGAAG CCGGTTCGTC GCGGCACAGC CCAACGATAT TCAGTGGCAA
GCGGGCTAG
|
|---|
| Protein sequence | MAEVKYLAEG SSGPERHGSG ARTARHDSVD HVSAELSTDY ALDPITLRFR QADVEHRYNV
QNYERHIGLT RLSIALGAVI FALYAVFDPY IIPEVATEAW AIRIGIACPL LLAIVAISYL
PGFSYRHQAL LSLAMAIPAL AVVAMIAIAA APGNYLYYAG VLIILSYVNC LWRLRYYYSI
LMSVLACAAY EYAVLFVNPI PTNMLINNNV FLIFGVGVSM FVNYVQEYHL RRSFIDNEKL
RSEQRRSERL LSRSEAANRA KNDFLAIMSH ELRTPLNAII GFSEIISNQM FGPVGQPKYV
DYAADIRSSG AHLLSIINDI LDISKAEAGK LQLEEEPIDP VEALNSTMRM FRQRASELGV
ELSFRVRDDI PWIIADPRLF NQVAINLTSN ALKFTPENGE VSVELGLNPA GDMVLAVRDT
GIGIKAADTT RIFEPFVQVE DAMSRTQQGT GLGLPLVRKI MNLHGGSIEL ESVVDEGTIA
RATFPRSRFV AAQPNDIQWQ AG
|
|---|
| |