Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_1113 |
Symbol | |
ID | 5455829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 1222755 |
End bp | 1224695 |
Gene Length | 1941 bp |
Protein Length | 646 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640876683 |
Product | ABC transporter related |
Protein accession | YP_001412391 |
Protein GI | 154251567 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG5265] ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCACGAC GAATGAAAAT TGCCTCGCGC GGCGGCCCCG ATCCGGTGAC CGGCGGGCTG CCCCCGCGGC GCCGCAATCA CTGGCGGACG CTCGCCACCA TGTTGCCCCG GCTGTGGCCG GAAGGGCGAA CGGATTTGCG CGCGCGCGTC GTCATTGCCG TGCTTGCCCT CGTCGCGGCC AAGGGCATCA CCGTCTATGT GCCTTTCATC TACAAGGAAG CGGTTGACCG CCTGTCGCCG GAAACGGTTG CCGCCGCCGC CGTTCTCGTG CCCGTCATGC TGATCGTCGC CTATGGCGTA GGCCGTATTT TGATGGTGGC GCTGGCGCAG TTGCGCGATG CCGTCTTTGC GAAGGTCGGC CAGAACGCAG TCCGCGAACT CGCTGTCGAA ACCTTCCGCC ATCTTCACGC CCTCTCGCTC CGTTTCCACC TGGAACGGCG GACCGGCGGT CTTTCGCGCG TCATCGAACG CGGCACCAAG GGTGTCGATT TCCTGCTGCG TTTCTCGCTG TTCAACATCT TTCCGACGAT CATCGAGCTC GGCCTTGTCT GCGTCATCCT CGCCTATGCC TTCGACATTC GCTACGCCGC CGTCACCGGC GTGACGGTCC TTCTCTACAT CGCGTTCACT TTCGCGGTAA CGGAGTGGCG GACGCGTTTC CGGCGCGAAA TGAACGATCT CGATACCGAG GCGAATACCA AGGCGGTCGA CAGCCTGCTC AACTATGAAA CCGTGAAATA TTTCGGCAAT GAAGAGCACG AGACAAGGCG CTTCGATCAT TCGATGACGG GCTATGAGCG CGCGGCCATC AAGACCGCCA CCTCGCTGTC GCTTCTGAAC ACAGGCCAGA CGCTGATCTT CAGCGGCGGT CTGACGATTC TCATGCTGAT GGCGGCACAG GGGATTGCGG AAGGCGTCCT CACCATCGGC TCCTTCGTGA TGATCAATGC CTACCTGATC CAGCTCTATC AGCCGCTCAA TCTTCTCGGC ACGGTCTACC GTGAAATCCG TCAGGCCTTG ATCGATATGG AAACGATGTT CGATCTGCTG CAGATACCGG CCGAGATCGA GGACGCGCCC GGCGCGCCCC CGCTGAAGGT CGAGGGCGGC GAACTGGTCT TCGAGAATGT CACCTTCTTC TACGATCCGG ACCGCCGCAT CCTGGACGAC GTCTCTTTCC GCGTGCCTGC CGGCCGCACA CTCGCGATCG TCGGGCCGTC CGGCGCCGGC AAGTCGACCA TCGCTCGCAT TCTCTTCCGC TTCTACGACA TCTCGGGAGG CAGCGTACGG ATCGACGGGC AGGATATCCG CATGATCACG CAGGATTCCC TGCGTGCCGC CATCGGCATG GTCCCGCAGG ATACCGTCCT CTTCAACGAC ACAATCCGCT ATAACATCCG CTACGGCCGC CCCGGTGCGA CCGACGCGGA GGTGGAGAAA GCCGCTGAAC TCGCGCGGAT CGGTCCCTTC ATCGAGCGTC TCCCCAGGGG CTACGAGACA CGCGTTGGCG AGCGCGGCTT GAAGCTCTCC GGCGGCGAGA AACAACGCGT GGCGATTGCG CGAACCATTT TGAAGAACCC GCCCGTCCTG CTGCTCGACG AAGCGACTTC CGCACTCGAT ACCCATACTG AAAAGGAAAT TCAGGCGGCG CTGAAAGGCA TCTCTCAAAA CCGCACGACG CTCATTATCG CCCACCGCCT TTCGACGGTG GTGGACGCCG ATGAGATACT CGTTCTCGAG CAAGGGCGGG TCATTGAGCG GGGGCGGCAC GATGCCCTGC TGGCGCTCGG CGGTGCCTAT GCCGCCATGT GGAACCGCCA GCGCGAGGCC GAGGCCGCCG GCGAGGAGAC GATACAGGAA GCCGGCCCGG CCGATGATGA AACCGCACCC GGGAAAGCCG CCGAACTTGA GCCGCTGACG GCAGATCCCG GTTATGCTTA A
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Protein sequence | MPRRMKIASR GGPDPVTGGL PPRRRNHWRT LATMLPRLWP EGRTDLRARV VIAVLALVAA KGITVYVPFI YKEAVDRLSP ETVAAAAVLV PVMLIVAYGV GRILMVALAQ LRDAVFAKVG QNAVRELAVE TFRHLHALSL RFHLERRTGG LSRVIERGTK GVDFLLRFSL FNIFPTIIEL GLVCVILAYA FDIRYAAVTG VTVLLYIAFT FAVTEWRTRF RREMNDLDTE ANTKAVDSLL NYETVKYFGN EEHETRRFDH SMTGYERAAI KTATSLSLLN TGQTLIFSGG LTILMLMAAQ GIAEGVLTIG SFVMINAYLI QLYQPLNLLG TVYREIRQAL IDMETMFDLL QIPAEIEDAP GAPPLKVEGG ELVFENVTFF YDPDRRILDD VSFRVPAGRT LAIVGPSGAG KSTIARILFR FYDISGGSVR IDGQDIRMIT QDSLRAAIGM VPQDTVLFND TIRYNIRYGR PGATDAEVEK AAELARIGPF IERLPRGYET RVGERGLKLS GGEKQRVAIA RTILKNPPVL LLDEATSALD THTEKEIQAA LKGISQNRTT LIIAHRLSTV VDADEILVLE QGRVIERGRH DALLALGGAY AAMWNRQREA EAAGEETIQE AGPADDETAP GKAAELEPLT ADPGYA
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