| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1062 |
|---|
| Symbol | |
|---|
| ID | 5456993 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | - |
|---|
| Start bp | 1166858 |
|---|
| End bp | 1168387 |
|---|
| Gene Length | 1530 bp |
|---|
| Protein Length | 509 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640876632 |
|---|
| Product | integral membrane sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_001412341 |
|---|
| Protein GI | 154251517 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 63 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGATCA GCGAGTTGCG ACAGAGGCGG GATACGCCCG GGCGCATGAG CGCGGACAAG
CAGCCGGAGC ACAAGCAGCC GGCTCATCAG CTGCGCACGC TCCAGAGCCG GCTGGCGCGG
ACCCTGCCTT GGCGCGGGAA CGGCGAGCCA CTCGCGGCGC AGATCCGGCT TGAGCAGCTG
CGCATGTTCG TCGACAGCCA AAAATTGCCG GTGCCTTATG CCTTTCCGGC GCTGATGATC
CTCTATGCCG CCTGTTTCTA TCAATCCATC GCCTGGTACT GGCTGGTGGT CCCTGTCGTG
ATGCTCTTCG GCGCGAATTG GCTGAACCGC CGGGTTATCG CCAAATTTCT GGTGGCCGCT
CCTGAAGGAA ACGATATCGC GATCTGGGAG CGGCGCTTCC TGACGGTCGC TCTCTGTTTT
TCTATCTCGA TTGCTTCGAC CGTCTTTTTC TTCTGGGTGC CGGGCGACCC TGTTCAGCAA
GCGTTCGTGC TGACGGCACT TCTCGTCACG CTGGCACCCA CCGCGCTCAT TACCTCCTGC
TACAAGCCGG CTTTCTACGC CAGGGTGCTG CCGGTGGTGC TGGCGGCGGG CCTGCGCCTC
GTTTCCTATG GAGACGTGCA GCATCTGTCG CTGGCGGCCG TTCTTCTCAT CTTCACGGCG
CTGCTCGCGC AGCTCACATC CCGCCTGAAC GGCATCATAC TGCATTCGAT AACGCTGCGT
GAGGACAAGA ACGGGCTGAT CGAGCAGCTG TTCAAGGCGA AACGCGAGTC GGACGCGGCG
CGCGCCCGCG CCGAAGAGGC GAACCGCGCG AAATCCCATT TCCTCGCCAA TATGAGCCAT
GAGCTCCGCA CACCCCTGAA TGCGATCATC GGCTTTTCGG AAGTGATGGC GTCCGAGATT
TTCGGTAAGC ATGGCGTTCC GACCTACAAG GAATATGCGA ACGACATCAA CCGCTCGGGG
CAGCACCTGC TCGGGCTCAT CAACGACGTG CTCGACCTGT CGCGCATCGA GGCGGGACGC
TTCCAGATTA CCGAGGAAGA GGTCGACATC GCTCACCTGG CGGAAGACTG CCGCCGCATT
CTGGAAATCC GCGCACAGGC GCAACGCGTT TCGATCACCG AGGATTTCGC GGACGGCCTG
CCGATCGTTT ACGGCGACGC GAGGGCGCTC CGCCAGACCT GGATCAACCT GTTGACCAAT
GCGATCAAGT TTTCGCCGCC CGATTCCGAG GTCAAGATGT TCGCGCGCAT GGAGGCTTCG
GGTGAGATGC GCTTCGGTGT ACACGATAAC GGGCCGGGCA TTGCGGAATC CGAAATCGAC
AAGGTGCTGC ATGCTTTTAC CCAAGGCGCC TCCGGCCTCG CCCAGCCGGG CAAGGGCTCG
GGCCTCGGCC TTTCCATCGT CAAGGGCCTG CTCGCGGTGC ATGGCGGACG TTTCGAACTG
AAAAGCCAGC TCGGCGCGGG CACGCAGGCG GAATGCACGC TTCCGCCGCA GCGCCTTCGC
AACGTGACCG CTGTTCCGCG CCGCGCCTGA
|
|---|
| Protein sequence | MTISELRQRR DTPGRMSADK QPEHKQPAHQ LRTLQSRLAR TLPWRGNGEP LAAQIRLEQL
RMFVDSQKLP VPYAFPALMI LYAACFYQSI AWYWLVVPVV MLFGANWLNR RVIAKFLVAA
PEGNDIAIWE RRFLTVALCF SISIASTVFF FWVPGDPVQQ AFVLTALLVT LAPTALITSC
YKPAFYARVL PVVLAAGLRL VSYGDVQHLS LAAVLLIFTA LLAQLTSRLN GIILHSITLR
EDKNGLIEQL FKAKRESDAA RARAEEANRA KSHFLANMSH ELRTPLNAII GFSEVMASEI
FGKHGVPTYK EYANDINRSG QHLLGLINDV LDLSRIEAGR FQITEEEVDI AHLAEDCRRI
LEIRAQAQRV SITEDFADGL PIVYGDARAL RQTWINLLTN AIKFSPPDSE VKMFARMEAS
GEMRFGVHDN GPGIAESEID KVLHAFTQGA SGLAQPGKGS GLGLSIVKGL LAVHGGRFEL
KSQLGAGTQA ECTLPPQRLR NVTAVPRRA
|
|---|
| |