| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1060 |
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| Symbol | |
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| ID | 5456433 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1164392 |
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| End bp | 1165585 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640876630 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_001412339 |
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| Protein GI | 154251515 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.596056 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATGA GCTTCTCACC GGAAGAACTT GCCTTCCGCG ACGAGGTTCG CGAGTTCATC
GCGAACAATT ACCCGCAGGA ACTCAAAGGC GGCCGCCGCA CGCGCGGCGA GATGTCGAAG
GAAGATATCC TCAAGTGGCA CCGCATCCTC TACAAGAAGG GATGGGTCGT GCCGCATTGG
CCGGTTGAGT ATGGCGGCAC CGGCTGGACG ATCACCCAGC GCTACATCTG GAACGAAGAG
AACGCGCGCG CCGAAACATC GCCGCTGCTG CCCTTCGGCC TCTCGATGGT CGGCCCCGTC
ATCTACACCT TCGGCAATGA AGAGCAGAAG AAGCGCTTCC TGCCCGGCAT CCTCTCCGCC
GACGATTGGT GGTGTCAGGG CTATTCGGAG CCGGGCTCCG GTTCCGACCT CGCCAGCCTT
CGCACCAGGG CCGTCCGCGA GGGCGATCAC TACATCGTCA ATGGCGGCAA GACCTGGACG
ACGCTCGCCC AGTTCGCCGA CTGGATGTTC TGCCTCGTCC GCACCGATCC GAACGCCAAG
GCCCAGGAAG GCATCTCCTT CCTGCTGATC GACATGAAGA CCCCCGGCAT CACCGTGCGC
CCCATCATCA CCATGGACGG CTCGCATGAA GTGAACGAGG TCTTCCTCGA AGACGTGAAG
GTGCCGGTCG AAAACCTGAT CGGCGAGGAG AACAAGGGCT GGACCTATGC GAAGTTCCTG
CTCGGCAACG AACGCTCCGG CATTGCCGGC GTCGCCCGCT CCAAAAAGGC CATCGAACGT
TTGAAGAAGA TTGCCGATGC GGAACTGGTC GATGGCGAGC CGCTCATGAA GACGGATGAA
TTCGCCCGCA AGGTCGCTGA ACTCGAGATC GATCTTTCGG CCCTCGAAGT CACCGAGCTG
CGCACGCTGG CTGCCGAAAG CAAGGGCCGC GGCCCCGGCC CGGAAGCCTC GATCCTCAAG
ATCAAGGGCA CGGAAATCCA GCAGCGCATC ACCGAGCTGA CAATGGAAGC CGTCGGCAAC
TACGCTTTCG TCCAGGCACC GCGCATGGAA GTCACGGGCA ACGAATTCCT GCCCGGTCCG
GATTACGCGC CGGGCGTCTC GCAGGACTAT TTCAACATGC GCAAGACGTC GATCTATGGC
GGGTCGAACG AGATCCAGCA CAACATCATC GCAAAAATGG TGCTCGGCCT CTAA
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| Protein sequence | MDMSFSPEEL AFRDEVREFI ANNYPQELKG GRRTRGEMSK EDILKWHRIL YKKGWVVPHW
PVEYGGTGWT ITQRYIWNEE NARAETSPLL PFGLSMVGPV IYTFGNEEQK KRFLPGILSA
DDWWCQGYSE PGSGSDLASL RTRAVREGDH YIVNGGKTWT TLAQFADWMF CLVRTDPNAK
AQEGISFLLI DMKTPGITVR PIITMDGSHE VNEVFLEDVK VPVENLIGEE NKGWTYAKFL
LGNERSGIAG VARSKKAIER LKKIADAELV DGEPLMKTDE FARKVAELEI DLSALEVTEL
RTLAAESKGR GPGPEASILK IKGTEIQQRI TELTMEAVGN YAFVQAPRME VTGNEFLPGP
DYAPGVSQDY FNMRKTSIYG GSNEIQHNII AKMVLGL
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