Gene Plav_1014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1014 
Symbol 
ID5456307 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1107384 
End bp1109066 
Gene Length1683 bp 
Protein Length560 aa 
Translation table11 
GC content62% 
IMG OID640876585 
Productpotassium-transporting ATPase, A subunit 
Protein accessionYP_001412294 
Protein GI154251470 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2060] K+-transporting ATPase, A chain 
TIGRFAM ID[TIGR00680] K+-transporting ATPase, KdpA 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.778785 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value0.749115 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTCCT CTGCCATCAT TTTTGTCGTG TTCATTGTCG GTGGTACGGC CCTCCTGTCC 
TGGCCGCTCG GCCGCTACAT GAAGTGGGCC ATGGACCCGG CCGCCTCGGC CAGCCGCTCC
GCGGACCGGT TCACCCACAT GTTTCAAACC ATCGGCGGCG GGGTCGCCCG TCAGTCACAG
GACTGGAAAA GATACCTGAC CGCCATGCTC GTCTTCAATG CGATCATGTT CGTAGTGAGC
TTCGCCATCC TGGCGCTGCA GCAATATCTG CCGCTCAACC CGGACGGCAA GGAAGCGATC
GAGGGAAGCC TGATCTTCAA CACGGCGGCT TCGTTCACCT CGAACACGAA CTTGCAGCAC
TATTCCGGTG AAGTGTCGTT GAGCTACCTG TCGCAACTCG GCGCGCTGAT GTGGCTTCAG
TTCGTCTCGG CGGCTACCGG CATCGCGGCG CTGGCGGCAC TCGCGCGCGG GCTGGCCGGC
CGCGAGATGG GGAATTTCTT CGTCGACCTG CAGCGCGCGT CGTTCCTCGT CCTGCTACCG
CTCGCCTTCG TGTTCGCTTG CGTGCTGGTC ATTGGCGGAC TGCCGATGAC ATTCGACGGG
GCGGTTGTGG CGACAACGCT GGAAGGTATT CAGCAGACCA TAGCGCGCGG TCCCGTCGCC
GCCTTTGTCG CGATCAAGCA GCTGGGAACG AATGGTGGCG GCTTCTTCGG ACCGAACAGC
ACGCATCCGC TCGAAAACCC CACCTTCTGG ACCAACGCGA TCGAGATGAT CGCCATCATC
CTCATCCCGA TGGCCTGCGT GTGGATGTTC GGCCGTATCG TCGGACGCAC CCGTCACGCC
GCCATCGTCT TCACCGTCAT GCTGACGTTG CTTCTCGTGA AGATCACCGG TGCGGTCTGG
TTCGAAGCAG CACCGACACA GGCCTTTGCC GGACTGCCGA TCGAACAGGA GGTCGGCAAT
CTCGAAGGCA AGGAGCTGCG GTTCGGCGCA ACCGGCGGTC CGCTTTGGTC GGTACTCACC
ACCTCCACCA GCAATGGCTC CGTCGGTGCC ATGCATGACA GCCTGAACCC CATGACGGGA
CTGATGCCGA TGATCGGCAT GTGGCTGAAC GCGACTTTCG GTGGCGTCGG CGTCGGCATG
ATCAACATGT TCCTCTACAT CATCGTCGGT GTGTTCATCG CCGGTATGAT GGTCGGCCGT
ACCCCTGAAT ATCTGGGCTG GCGGGTGGAG GCGCGCGAGG TCAAGTTCGC GATCCTCGCG
CTGGTTGCCC ACGGGCTCTT CATTCTGGGT GGCACCGCCA TTTTTGCCGC AACGCCGTGG
GGCTTTGAGA CTCTCAACAA TACGGGCCCG CACGGCTTCA GCGAGATCCT TTATGAGTTC
AGCTCCGCGA GCGCCAACAA CGGATCGGGC TTCGAAGGGC TTGGCGACAA CACCGCGCCC
TGGAACATCG CTACCGGCAT CATCATGCTG CTCGCGCGGT TCATACCGAT CATCCTGCCA
TTGGCAATCG TCGGCTCGCT GATGGCGAAA CGGCGCAATG CGGAATCGGT CGGCACGCTT
GGCGTCGAAG ACGGCACCTT TGGCGGCATG CTGCTCGCCA CGATCCTCGT TGTCGGCGCT
CTGACCTTCT TCCCCGCAGC CACGCTGGGG CCGATCGCCG AGCATCTAAT GTACATGAAC
TAG
 
Protein sequence
MLSSAIIFVV FIVGGTALLS WPLGRYMKWA MDPAASASRS ADRFTHMFQT IGGGVARQSQ 
DWKRYLTAML VFNAIMFVVS FAILALQQYL PLNPDGKEAI EGSLIFNTAA SFTSNTNLQH
YSGEVSLSYL SQLGALMWLQ FVSAATGIAA LAALARGLAG REMGNFFVDL QRASFLVLLP
LAFVFACVLV IGGLPMTFDG AVVATTLEGI QQTIARGPVA AFVAIKQLGT NGGGFFGPNS
THPLENPTFW TNAIEMIAII LIPMACVWMF GRIVGRTRHA AIVFTVMLTL LLVKITGAVW
FEAAPTQAFA GLPIEQEVGN LEGKELRFGA TGGPLWSVLT TSTSNGSVGA MHDSLNPMTG
LMPMIGMWLN ATFGGVGVGM INMFLYIIVG VFIAGMMVGR TPEYLGWRVE AREVKFAILA
LVAHGLFILG GTAIFAATPW GFETLNNTGP HGFSEILYEF SSASANNGSG FEGLGDNTAP
WNIATGIIML LARFIPIILP LAIVGSLMAK RRNAESVGTL GVEDGTFGGM LLATILVVGA
LTFFPAATLG PIAEHLMYMN