Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_0980 |
Symbol | |
ID | 5456422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 1059130 |
End bp | 1060032 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640876551 |
Product | ribokinase-like domain-containing protein |
Protein accession | YP_001412260 |
Protein GI | 154251436 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 0.167032 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGGCA GGGTTCTGTG CGTCGGGCGC AACAGCCTCG ATCTCGTCTT CAATGTCGAG CTCGCGCGCC TGCGGCCGGA CAGCAAGCAG CGCACAAGCG ATCCTGCTGT GCTTGTCGGG GGCCAATGCG TGAACGCGGC GGTGACGCTG GCAGGGCTCG GCTGTGCGGT TTCCTATGCG GGTGTCGTCG GGGGCGATGC AGGAGCGGAG CGGGTTCTTG CTTTTCTGCA GGAGCGCGGC ATCGATTGCG CCGCCGTCGA AACCGCCGCC GGCATGGCGA ACCCCTGCGC CTACATCATG GTGGACGCAA AGACAGGCGA GCGAAGCATC GTCGAGACCG CCCCGGACAG CTTTCCCCGC TTCACGGGGC GCATCGCGGA GAAGCTCTGG GCCGTGACGT CGAGCGTCTA TTTCGACGGG CACGAGGAAG ATGCCTCGAT TGCGATTGCC GCCGAGGCAG CGCGGCGCGG CGTGCCGACG CTGACCGATG CCGAAACATT GACGGAGGGC ACGCGGGAAC TGCTGTCGCT GGCCGATACG GCCATCGTGC CCGGAGCGGT GGCGATGGAG CTGGCGGGGT CCGACAGACC CGACGACATG CTCCGGGCGC TTGCAGCTCT CGGCGGCACG GCGCATGTCG TTACCCTCGG CGAGGAAGGG GCATTCGGCG CGGTGGCGGG CGGGACGACG CACCGGGTTC CCGCGTTTCC CTGCAACGCC ATAGATACGA CCGGCGCGGG CGATGCGTTT CACGCGGGCT TCCTCTTCGC GAAGATGGCC GGAGCGGCCT TCCCGGATGC CATGACCTTC GCCGCGCGCG TCGCGGCGAA GGCTTGCGAG GTGAGGGGAG CCAATCTGGA TGCTCGGACG CTCGCACTGC TTGGCGCGGA CTTCAGTCGA TGA
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Protein sequence | MKGRVLCVGR NSLDLVFNVE LARLRPDSKQ RTSDPAVLVG GQCVNAAVTL AGLGCAVSYA GVVGGDAGAE RVLAFLQERG IDCAAVETAA GMANPCAYIM VDAKTGERSI VETAPDSFPR FTGRIAEKLW AVTSSVYFDG HEEDASIAIA AEAARRGVPT LTDAETLTEG TRELLSLADT AIVPGAVAME LAGSDRPDDM LRALAALGGT AHVVTLGEEG AFGAVAGGTT HRVPAFPCNA IDTTGAGDAF HAGFLFAKMA GAAFPDAMTF AARVAAKACE VRGANLDART LALLGADFSR
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