| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0979 |
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| Symbol | |
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| ID | 5455557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1057075 |
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| End bp | 1058943 |
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| Gene Length | 1869 bp |
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| Protein Length | 622 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640876550 |
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| Product | alkaline phosphatase |
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| Protein accession | YP_001412259 |
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| Protein GI | 154251435 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3540] Phosphodiesterase/alkaline phosphatase D |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.143417 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAGTT TTCGACCGAC ACGCCGCGAT GCTCTGAAGG GATTTGCCGC TACCGGCGGT
GTCGCCGTCA TGGGCACGTC CGGCTGCTCC GAAGAGCCGG AGGTCATCGC GGAATTCCAC
CATGGCGTTG CGAGCGGCGA CCCGGAAGCG ACCGCCGTCA TCATCTGGAC CCGCGTCACC
GCTCCGGGCG AGGCGAGCGT TCTCTGGCAA GTGGCAAAGG ACGAGGCATT TGCCGAGATC
GTGAGCAAGG GCGAGGCCTC CGCGAAGGCC TCCAGCGACT ATACGGTGAA GATCGATGTG
CGCGGCCTTG AGCCCGGCCA AGGTTATTTC TACCGCTTTC TCTCGGGCAG GGCTGTCTCT
CCGGTCGGCC GCACCCGCAC TCTCGCCGCA AAGGATGCAA CGACGCTCCG TCTCGGTGTC
GTCTCCTGCT CGCATTACGG CTTCGGCTTC TACAACGTCT ATCGCGAACT CGCGAAGGAG
CAGGACCTCG ACGCCATCGT CCACCTTGGC GACTACATCT ACGAATACGG ACCTGATGGT
TATGGCGGAC CCGAGGCAAA GGAGATTGGC CGCGAGCAGG AGCCACCGCA CGAGATCGTG
ACACTCGACG ATTACCGCAT GCGTTTTTCC CAGTATCGCC GCGATGCCGA CCTTCAGGCC
GCGCATGCGG CCGCGCCTTT CATCACCATT TGGGACGACC ATGAAACGGC GAATAATTCA
TGGTCGGGCG GCGCCCAGAA CCATCAGCCG GACACCGAAG GCAAGTGGGA GACAAGGCGG
GATGCGGCGC TCCGCGCCTA TTTCGAATGG ATGCCCATGC GCGACCCGAA ACCGGGAGAA
GCTTTCCATC GTCTCCATCG GACCTACGAG ATGGGGACGC TTGCGACACT CCATCTCATT
GAGACGAGAC TCACCGCCCG CAGCGGCGAG GTGAGCTATG AAGACGACAT GGTCTATTTC
GAGACCGCCT ATGATGTTTC GGACCCGCAA GCGCCGCTCG TCCTGAACGC CGAAGATGCC
GCCTTGCTTC CGGCAGGCCG GGCCGAACGC CTGAAAACAC CTTGGCGTGA AAGCGACGGC
GCCGCGATCA CAGATTACAA GCAAGTCCGC GAATGGGCCG ATACCGGCCT GCCGGACGGA
TACGTCTACA AGCCCGACCT CGCGCGCTTT CGCGAGGAAG TTCTGGGAGA TCCCGCCCGC
GAACTGCTCG GTGAGGCACA ATTGGGATGG CTCGCGGGCG AGTTGAAGGC ATCGCGCGCG
AATGAGGTGC CGTGGCAGAT CCTCGGCAAC CAGGTCATCA TGGCGCGCAT GGATGCGCCG
GACTTCACGG TGGCCTTCCC ACCCGAGGTG ATCGAGCCCG CGATACGGGA CAACCCCTAT
ACCCGTCAAT GGGTGGAGCG CACGAAGCTC CGCCTGCCCA TCAATCCCGG CGTATGGGAC
GGCTATCCTG CCTCGCGTCA GCGCCTGTAT GAAACGGTGC GCGAAGCGGA AGCAAGTCTC
GTCGTGCTGA CGGGCGACTC GCATCAGTTC TGGGCGAACG ATCTTCGCGA GACGCCGGGC
GGCAGGCGCA TCGGCGTCGA ATTCGGTACC AGCAGCGTCA GTTCAAAGGG CGGTTACGAC
TATCTCGCCG CCGACCCGCG CGCCTATGAC ATCACCGAGG AGACGCTGCT GCGCGATGTG
CCCGAGATCG TCTATTGCGA GACGCGTCAC AGGGGTTTCA TCCTGCTCGA AATTACCGCA
GAAGCTGTCG AGGCGGATTA CAGGGCCGTT TCGACCGTTC GCTCCCGCGA CTACACATCG
TCGAGCCTCA AGCGGCTTCG CGTCACCCGC GAAGGGCCGG GCGAGCTTTC GGATCTCGTC
CCGGTTTGA
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| Protein sequence | MMSFRPTRRD ALKGFAATGG VAVMGTSGCS EEPEVIAEFH HGVASGDPEA TAVIIWTRVT
APGEASVLWQ VAKDEAFAEI VSKGEASAKA SSDYTVKIDV RGLEPGQGYF YRFLSGRAVS
PVGRTRTLAA KDATTLRLGV VSCSHYGFGF YNVYRELAKE QDLDAIVHLG DYIYEYGPDG
YGGPEAKEIG REQEPPHEIV TLDDYRMRFS QYRRDADLQA AHAAAPFITI WDDHETANNS
WSGGAQNHQP DTEGKWETRR DAALRAYFEW MPMRDPKPGE AFHRLHRTYE MGTLATLHLI
ETRLTARSGE VSYEDDMVYF ETAYDVSDPQ APLVLNAEDA ALLPAGRAER LKTPWRESDG
AAITDYKQVR EWADTGLPDG YVYKPDLARF REEVLGDPAR ELLGEAQLGW LAGELKASRA
NEVPWQILGN QVIMARMDAP DFTVAFPPEV IEPAIRDNPY TRQWVERTKL RLPINPGVWD
GYPASRQRLY ETVREAEASL VVLTGDSHQF WANDLRETPG GRRIGVEFGT SSVSSKGGYD
YLAADPRAYD ITEETLLRDV PEIVYCETRH RGFILLEITA EAVEADYRAV STVRSRDYTS
SSLKRLRVTR EGPGELSDLV PV
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