| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0936 |
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| Symbol | |
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| ID | 5457012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1003969 |
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| End bp | 1005822 |
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| Gene Length | 1854 bp |
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| Protein Length | 617 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640876507 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_001412216 |
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| Protein GI | 154251392 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.422617 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCGGGAT CGGAACACAC GACAGGAGAG GCTGTGCCCG AAGTGCAGGC CGCCTCGGAG
GTGGAGTGCA GCTATCGCTG GACGGGCGAG TTCGCCGATC CCGCGCTGGA GGCAGGCTAT
CTGCGCGCCA GTTGGACCGA AGCACATTCA AGACTGAAGG CGCTTCTCAT AGCCATCTAT
GTCTTTGTCA GCTGGGCCGC CTTCGACCTG GTGGCTATGG GCTTCGGCTG GCCTTTTGTC
CTGTTGACCG TCGCCCGCTT CGCCGCGCTC GGCAGCACGC TTCTTGCCCT GAAAGTGTTC
CGCACGCCGG ATAACCGATC CGCGTTCATG ATATGCGCCG GCGTTACGCA AGCCATCGTC
TGCATTGTCG CGCCGCTCTC GCTCATGCTG GGCGGGGTTC AGTTCGCCGC GGCTTTGCTC
AGCATCGTGG TCATTCTTTT CGCATTCTAT GTCGGCGTTC CTTCGCGTCT GCCGGTCAAT
CTTGCCCTGT CCGCGAGTCT CAGCCTCGGT TTCGTCGCGG TAACGCCTTT TCTCACAGAA
GTCTCTCTAC TGACGATCCT GGAGATCGGT GTTCTCTTCA TGGTGGTGAA TGCCATCGGC
GCTGAATTGG TCCGGAGCGC CAACCGTCTG CGCCGGACCG GGTTTCTCAC TCTGATGCGG
CAGCAGGAGC TCTACGAGCA ACTGAAGCGT GAGGTTGAAG TGCGCCAAGA AGCCGAGCAG
GCGGTTCGCG CAACCGAGGA AAGCTTCCAG AGCATCTTCT ATGCAGCGCC CTTGCCGATC
TCTCTGGTGG ACCCGTCGAC CTTCCGCGTC ATGCAGGCAA ACATGGCGGC GCTCGCGCTT
TTCGGTATCG ACGAAACGGA AGCCGATGGT TTCGACGTTC GCGAGTTTTT CGACGAGGAA
GACCTTCCCG CCCGCCTGGA CCGTCTGGTT CTCGGCGGCC GTGCCGGCGC CCCGGTGGAA
TTCTGTCTGA AGCGTCGCGA TGGCGCGGTT ATTTGGGCGC TGGTATCGGC TGCTGTTGTG
AGCTTTCACG GCCGCCGTGC GCTGCTGATC GGCATACAGG ACGTAACGGT GCGTCACAAG
GAAGCCGAGG CGCTGCGAGA GGCGCGCGAT CAGGCGACGG CCGCCAGCCG TTCGAAATCT
GAATTCCTCG CCAATATGAG CCATGAATTG CGCACACCGC TGAATGCCAT CATCGGATTT
TCCGAGGCGT TGGAGCGCGA GCTGTTCGGT CCCGTCGGCA ATCCGCGCTA CCGCGAGTAC
GCCGAGGATA TCCATGATAG TGGCGTTCAC TTGCTCAGCC TGATCAATGA CATTCTCGAT
CTTTCCAAAA TCGAGGCCGG TCATTTCAAG CTGCATGAGG ACGAAACGGA TCTCGATCAT
ATCGTCGCTG CCGCTACGCG CATTGTGCGC CACCGCGCGC AGCAGGCGAA CATCGCGATC
GAATGCAGGT TGCCTCAGCC GCCGCTTGCT GTGCTGGTGG ATGAACGTGC CCTGAAGCAG
GTGCTGATAA ATCTCGTGTC CAATGCCGTG AAGTTCAGCC CGGATGGGAG TTTGATTCTC
GTCGAGGCGA ACGTGACCAC TCAAGGGCTT CGCATATCGG TTGCGGACAA AGGCGTCGGA
ATTGCGCCGG AAGACATTCC GCGGGCGCTG ACGCCGTTCA CGCAGCTCGA CGGTTCTCTT
TCACGCGCTC ATGAAGGCAC GGGCCTCGGT CTTCCATTGG CCAAGCATCT GACGGAGCTT
CATGACGGCA AGCTCTTCAT CGAGAGCGCC GTCGATGTCG GAACGACCGT TTATGTCGAT
CTGCCGCTAT CGCGCGTTGT CGGACATGCG GAGCAGAAAC AGGCGATCGT CTGA
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| Protein sequence | MPGSEHTTGE AVPEVQAASE VECSYRWTGE FADPALEAGY LRASWTEAHS RLKALLIAIY
VFVSWAAFDL VAMGFGWPFV LLTVARFAAL GSTLLALKVF RTPDNRSAFM ICAGVTQAIV
CIVAPLSLML GGVQFAAALL SIVVILFAFY VGVPSRLPVN LALSASLSLG FVAVTPFLTE
VSLLTILEIG VLFMVVNAIG AELVRSANRL RRTGFLTLMR QQELYEQLKR EVEVRQEAEQ
AVRATEESFQ SIFYAAPLPI SLVDPSTFRV MQANMAALAL FGIDETEADG FDVREFFDEE
DLPARLDRLV LGGRAGAPVE FCLKRRDGAV IWALVSAAVV SFHGRRALLI GIQDVTVRHK
EAEALREARD QATAASRSKS EFLANMSHEL RTPLNAIIGF SEALERELFG PVGNPRYREY
AEDIHDSGVH LLSLINDILD LSKIEAGHFK LHEDETDLDH IVAAATRIVR HRAQQANIAI
ECRLPQPPLA VLVDERALKQ VLINLVSNAV KFSPDGSLIL VEANVTTQGL RISVADKGVG
IAPEDIPRAL TPFTQLDGSL SRAHEGTGLG LPLAKHLTEL HDGKLFIESA VDVGTTVYVD
LPLSRVVGHA EQKQAIV
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