| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0875 |
|---|
| Symbol | |
|---|
| ID | 5454719 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | + |
|---|
| Start bp | 946037 |
|---|
| End bp | 946447 |
|---|
| Gene Length | 411 bp |
|---|
| Protein Length | 136 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640876446 |
|---|
| Product | chromosomal replication initiator DnaA domain-containing protein |
|---|
| Protein accession | YP_001412155 |
|---|
| Protein GI | 154251331 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0593] ATPase involved in DNA replication initiation |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.386631 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 58 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGAAC GTTCTTTTTT TGTTCTTTGG TGGGAGCGGG CAATGGATTG GCAAAATTTC
GCGGAAAGCG GCTGGGTGGC GGGCACTATC AACCGGGTGC AGGCGGCCCA GGTGGCCTTG
ATGCAGGAAA CGGTGGCGCG GGCCTGGAAC GTGCCGGTGG ACGAAATACG CTCGCCGACG
CGGCGCAGGG CACCCGTGGC GCAGGCGCGG CAGGTGGCGA TGTATCTGAC GCATGTGCTT
TACGGCTTCA GCCTGTCGGC GGTCGGCCGG CATTTCGGAC GCGACCGGAC GACGGCGGCA
CATGCCTGCC GGCTGGTGGA GGACCGGCGC GACGACGAGA ATTTCGACAT GCTGCTGGAC
CGGCTGGAAC ACGCGCTGCG CCGCGCCGGC GCAGCGCAGG CGCTGCAGTG A
|
|---|
| Protein sequence | MKERSFFVLW WERAMDWQNF AESGWVAGTI NRVQAAQVAL MQETVARAWN VPVDEIRSPT
RRRAPVAQAR QVAMYLTHVL YGFSLSAVGR HFGRDRTTAA HACRLVEDRR DDENFDMLLD
RLEHALRRAG AAQALQ
|
|---|
| |