Gene Plav_0858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0858 
Symbol 
ID5454548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp933555 
End bp934676 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content66% 
IMG OID640876429 
Producthypothetical protein 
Protein accessionYP_001412138 
Protein GI154251314 
COG category[S] Function unknown 
COG ID[COG4427] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAAGTTG GAAAGGAAGT CTTCATGCCC AACCACGATC TCATCCGTAA CGACTTCCTG 
CGCCAGGCGC TGGCTTGCGA GCATCTGGGT TCGCCCTTCA CGGCGCGTGT TTGCCGCGCG
CTGGCGGCAG GACTGACGGC GGAAACGCGG TTCGGACAGC GTATTCTGGA TTGGGAGGGG
AAGCCCGAGA GCGATGCGCT GCCGCTGCGC GCGGCGGGTG CGCTGAATGC ACTCGCGCGC
TCGGGCCGGG CGCCGGAACT TGCGGCGGTC TATCCGCCGC ATGAAGCGGA CGAGAAGACG
CTGGCGCGCG CGATCGAAAA GGCGACGGCC GCGCATGACG ATTTTCTCGA AGGTTTTCTC
GACAGCGCGC CGCAGACGAA CGAGGTCGCG CGTTCGAGCG CGATCCTCGG GCTCGCGCTT
CACGTCGCGA AGCGGACGGG ACTGCCCTTG TCGGTTCATG AGATCGGATC GAGCGCCGGA
TTGAATCTCG GCTTCGACGC CTATGCCTAT GAGCTCGAAA CGGCGCGCTG GGGAGACCCC
GATGCGGCGG TGACGATTGC CGCGCGCTGG GAGGGGGCTC TGCCGCCACT CGACGCGAAG
TTGAAGGTGG CCGCGCGGAA AGGCTGCGAC CTCAACCCGC TCGACGCAGG AAACGCGGCA
GACCGGGAAA GGCTACTCGC CTATATCTGG CCGGACCAGA CGGCCCGCCT CGCGCGGATC
GAGGCGGCGC TCTCATTCGC CGCGCGGTCT GGCACGAAAG TGGAGAAGGC GGATGCGGCC
GAATGGGTCG AGCGGCATTT CGGCGGCGAG GGGAAGAAGG GCGAGGTGCG CCTGCTGATG
CATACGATCG TCTGGCAATA CCTGCCGAAG GAAACGCAAG CGCGGATCAC GGCGGCGATG
GCGCGCGCGG GCGCGCATGC GACGAAGGAC GCGCCGGTGG CATGGATTTC GGTCGAGGCC
GATGGCAAGG ACGCGGCCTC GGCTTGCATG CGCTTGCGGC TCTGGCCGGA GGGGGAAGAT
GTGGAACTCG GCCGCACGGA TTTTCACGGA AGGTGGGCGA AGTGGAGTTC CCCATTTGAC
CGTGCGTCAG TGTCTACTTC ACCGCGCTTC CGAACTATCT GA
 
Protein sequence
MEVGKEVFMP NHDLIRNDFL RQALACEHLG SPFTARVCRA LAAGLTAETR FGQRILDWEG 
KPESDALPLR AAGALNALAR SGRAPELAAV YPPHEADEKT LARAIEKATA AHDDFLEGFL
DSAPQTNEVA RSSAILGLAL HVAKRTGLPL SVHEIGSSAG LNLGFDAYAY ELETARWGDP
DAAVTIAARW EGALPPLDAK LKVAARKGCD LNPLDAGNAA DRERLLAYIW PDQTARLARI
EAALSFAARS GTKVEKADAA EWVERHFGGE GKKGEVRLLM HTIVWQYLPK ETQARITAAM
ARAGAHATKD APVAWISVEA DGKDAASACM RLRLWPEGED VELGRTDFHG RWAKWSSPFD
RASVSTSPRF RTI