| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0852 |
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| Symbol | |
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| ID | 5455998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 926270 |
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| End bp | 927067 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640876423 |
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| Product | phytanoyl-CoA dioxygenase |
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| Protein accession | YP_001412132 |
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| Protein GI | 154251308 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG5285] Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACAA CAATGGAAAA GCTCCCCCGC GCGCGCAGCG TTGCGGAGGC AAAGCAGCAA
CTCACCGAAC ACGGCCTCAC GATCATGGAA GACGTGCTCG ACGCAGAAGG CATCGCAAGG
GTCCGCGCGG CACTCAAGCG GGGCATCGAA GCGGACAATG CAAACGGCGT TCAGCTTCAC
GGATTTTCCT TCGATCCCGA CACACTCAAC ACGCGCGTTT TCAATCTCAT CGGCAAGGAT
CAGGTCTTCC GCGATCTCGT GCAGCATCCC GCTGCCGTCG AGCTGGTCCG CTATCTTCTC
GACGGTCCTT TTCTCCTGTC GAATTTCTCC GCGAATGTCA CGGCGCCCGG TTCCGGGGCG
ATGGGGATGC ATGCCGATCA AGGTTATGTG CCGGCACCCT GGCCATCCTA TCCGCTGGCG
ATCAACGTTG CGTGGGCACT CGATGACTTT ACGGTTGAAA ACGGCGCGAC ACGCTTCGTG
CCCGGTTCTC ATCTGAAAGA TCACGGCCCC GGCAAAGCCA GCGAACGCGC GCAAACAGTG
CCCATCATCT GCAAGGCCGG CTCCATCTTC GTGATGGACG GTCGCGTCTG GCACCAGACT
GGACCGAACA CAAGCGGTGG AGACACGCGC GCCGGGCTCT TCGCCTATTA CGTCCGTCCT
TTTATCAGGC CGCAATGGAA CTGGTATCTG ACGCTGGCGC CGGAAGTCGT GCGCGGCGCC
AGCCCGCTCT TGCGCGAAAT GCTCGGCTAT GAACGGAACC CGACGGGCGA TCTGCAAACG
GTGCATTCCG GCACTTGA
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| Protein sequence | MTTTMEKLPR ARSVAEAKQQ LTEHGLTIME DVLDAEGIAR VRAALKRGIE ADNANGVQLH
GFSFDPDTLN TRVFNLIGKD QVFRDLVQHP AAVELVRYLL DGPFLLSNFS ANVTAPGSGA
MGMHADQGYV PAPWPSYPLA INVAWALDDF TVENGATRFV PGSHLKDHGP GKASERAQTV
PIICKAGSIF VMDGRVWHQT GPNTSGGDTR AGLFAYYVRP FIRPQWNWYL TLAPEVVRGA
SPLLREMLGY ERNPTGDLQT VHSGT
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