| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0826 |
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| Symbol | |
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| ID | 5455869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 898189 |
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| End bp | 899187 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640876397 |
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| Product | 2-nitropropane dioxygenase NPD |
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| Protein accession | YP_001412106 |
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| Protein GI | 154251282 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.289165 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 0.500407 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTCAAAA CCAGATTCAC GGAAATGTTC GGGGTCGATC ACCCCATCGT CCAGGGCGGC
ATGCAATGGG TCGGCCGCGC CGAACTCGTC GCCGCCGTGG CGAATGCGGG CGCGCTCGGC
TTCATCACCG CGCTCACCCA GCCGACGCCT GAAGACCTCG TGAAGGAAAT CGCCAAGTGC
AAAGGCCTCA CCGACAAGCC TTTCGGCGTG AACCTCACCA TCCTGCCGGC GCTGAAGCCG
CCGCCCTATG CCGAATACCG CCAGGCGATC ATCGAGTCCG GCGTGAAGAT CGCGGAAACC
GCGGGCTACA AGCCGCAGGA ACACGTCAAT CACTTCAAGG AACACGGCAT CAAGGTCATT
CACAAATGCA CCGCCGTCCG CCACGCGCTC TCCGCCGAGC GCATGGGCGT CGATGCCATC
TCGATCGACG GCTTCGAATG CGCGGGCCAT CCGGGCGAGG ATGACATTCC GGGCCTGATC
CTCATTCCGG CCGCCGCCGA CAAGGTGAAG ATCCCGATGA TCGCGTCTGG CGGCTTCGGC
GATGCGCGCG GCCTCGTCGC CGCGCTCGCG CTCGGCGCCG AAGGCGTCAA CATGGGCACA
CGCTTCATGT GCACCAAGGA AAGCGCCATC CATCAGAAGG TGAAGGAGCA GATCGTCGCC
AATGACGAGC GGGCGACCGA TCTCATCTTC CGCACGCTGC ACAACACGGC CCGCGTCGCG
AAAAACGCCG TCAGCCAGGA AGTCGTCGCC ATCGAAAAGA AGGGCGGCGC CAAGATCGAG
GACATTGCGC ATCTCGTCGC CGGTGCTCGT GGACGCGTCG TCTATGAAGC GGGCGACCCC
GATCACGGCA TCTGGTCGGC CGGCATGGTG CAGGGCCTGA TCTACGACAT CCCGTCCTGC
CAGGAACTGG TGACGCGCAT GGTTTCGGAA GCCGAAGCCA TCATCAAGAC GCGCCTCAAC
CGCATGGCCG GCATGTCCGT GGCGCAGGCT GCGGAATAA
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| Protein sequence | MLKTRFTEMF GVDHPIVQGG MQWVGRAELV AAVANAGALG FITALTQPTP EDLVKEIAKC
KGLTDKPFGV NLTILPALKP PPYAEYRQAI IESGVKIAET AGYKPQEHVN HFKEHGIKVI
HKCTAVRHAL SAERMGVDAI SIDGFECAGH PGEDDIPGLI LIPAAADKVK IPMIASGGFG
DARGLVAALA LGAEGVNMGT RFMCTKESAI HQKVKEQIVA NDERATDLIF RTLHNTARVA
KNAVSQEVVA IEKKGGAKIE DIAHLVAGAR GRVVYEAGDP DHGIWSAGMV QGLIYDIPSC
QELVTRMVSE AEAIIKTRLN RMAGMSVAQA AE
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