| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0825 |
|---|
| Symbol | |
|---|
| ID | 5456500 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | - |
|---|
| Start bp | 897055 |
|---|
| End bp | 897966 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640876396 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001412105 |
|---|
| Protein GI | 154251281 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAACG ACGCCAACTG GGACGCCTAT CGCATTTTTC TCGCGGTGGT GGATACGCAA
AGCCTGTCCG GCGCGGGCCG GCGGCTCAAG CTCAGCCATG CCACGGTGGG CCGCCATATC
GCGACGCTGG AGAAGCGGCT CGGCACGAAG CTCTTCGTGC GGGAGCCGAC CGGCTATGCG
CTGACGGGCG CCGGCGAGCG CTTGCGCGCG GAAGTGGAGC CGATGTCGCT GGCCGCCGAG
CGCGCGCTGC ACGCAGCATC GAGCGAGGAT GGGCAGGCGC AGGGGCTGGT GCGCGTCGCC
ATTCCGCACA GCATCGCCTC CTACTGGTTC ATGCCCTATC TCGACGAATT CGCGGCGCGG
CATCCCGGCA TCGAGATCGA GATCGTGAAC GAGGTGACGC AGGTATCGGT GAAGCGGCGC
GACGCCGACA TCGTCATCCG GCCTTACGGG CCGGGGCGCG AGAACGTGGT GGGCCGCAAG
ATCGGCCGCA TCGGCGTCGG TTTCTATGCA TCGCGCTCCT ATGCGGAACG CTTCGGCCTG
CCCTCGAAGC GCGAGGAATG GAAAGAGCAT CGGATCATCG GCTTCGGCGG ACGGGCAGCG
GAGGTGGAAC TCGCGGACTG GCTCGCCCAT GTGACGCAGG GGGCGCGGGT GGCGCTGCGC
TGTTTCTCGG ACGCCGATCT CGTGCAGGCG GTCAGGGCCG GTGTCGGCAT CTCGACACTC
GTCTGCCTGA CGGGCGACCA TTATGACGAC CTCATCCGCA TTGCGCCGCA GAAGCTCGCC
AATGGCACGG AGATGTGGCT GCTCGCGCAT CCCGACCTTC GCGACACCGC GCCCGTGCGC
GCCGTCATCG ATTTCCTCGG CGAGAAGGCG AAGGTGGATC GCGACCGGCT GGCGGGGCGA
AACGTCACCT GA
|
|---|
| Protein sequence | MNNDANWDAY RIFLAVVDTQ SLSGAGRRLK LSHATVGRHI ATLEKRLGTK LFVREPTGYA
LTGAGERLRA EVEPMSLAAE RALHAASSED GQAQGLVRVA IPHSIASYWF MPYLDEFAAR
HPGIEIEIVN EVTQVSVKRR DADIVIRPYG PGRENVVGRK IGRIGVGFYA SRSYAERFGL
PSKREEWKEH RIIGFGGRAA EVELADWLAH VTQGARVALR CFSDADLVQA VRAGVGISTL
VCLTGDHYDD LIRIAPQKLA NGTEMWLLAH PDLRDTAPVR AVIDFLGEKA KVDRDRLAGR
NVT
|
|---|
| |