| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0816 |
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| Symbol | |
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| ID | 5456716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 884598 |
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| End bp | 886370 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640876387 |
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| Product | asparagine synthase (glutamine-hydrolyzing) |
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| Protein accession | YP_001412096 |
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| Protein GI | 154251272 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
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| TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing)
[TIGR03104] asparagine synthase family amidotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.816546 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGTGGCT TCAGCGGCGA AATAAGATTC GACGGCGTGC AGGCGGATGC CCGTGCGGTA
ATGACCATGT GCGACGTCCT CGCACCGAGA GGGCCAGACG GAAGCGGCCT TGCCGCGAGT
GGCAATGTGG CAATGGGACA CCGCCGGTTG AAGATCATCG ATCTCAGCGA ACGCGGCAGC
CAGCCAATGA CGGATCCGGC GCTTGGGCTA ACCCTCGTGT TCAATGGCTG CATCTACAAT
TATCGTGAAT TGCGCGAGAA GCTCGAAGCG AAGGGCTACA GCTTTCATTC GGCAAGCGAC
ACGGAAGTCG TGCTGAAGGC ATGGCACGCT TGGCGCGCCG ATGCGCCCAC GCATATGAAC
GGCATGTTCG CCTTCGCCGT GCACGAACGT GACAGCGGCC GCACCGCGCT GGCGCGCGAC
AGGCTCGGCA TCAAGCCGCT TTATCTCTCC CTCAGCGGCA AACGGCTGCG CTTTGCCTCG
ACGCTTCCCG CCATATTGGC GGCGGGCGAT GTCGACACGT CGATCGATCC GCAAGCACTT
CAGGCTTACA TGACATGGCA CGCCGTCGTG CCGCCACCGC TGACAATGCT GAAAGGCATC
CGCAAGCTGC CGCCGGCGAC CGTCGCCATA TTCGAGGCAG ATGGCAGCCG CCGGGATACC
GTCTACTGGT CACTCGGCTA TGAGCGCTCC CGGGAAGACG CAATGCGCAG TGAAGGCGAT
TGGGCGGAAA TGCTGCACGC ATCGCTTATC GCCGCCGTCG ACCGGCGAAT GATTGCCGAC
GTACCTGTCG GGGTTCTGCT TTCGGGTGGT GTCGATTCAA GCTTGATTGT CGGCCTTCTT
GCCGAGGCCG GTCAGCAATC GCTCAATACA TTCTCTATCG GCTTTGAAGC CGCGAATGGA
GAGCTCGGCG ACGAGTTCAA ATATTCCGAC ATTGTCGCGA AGCACTTCGG TACGGAGCAT
CACAAGATTT TCGTACCGTC AAGCGAGCTG CTCGATGCGC TCCCCCGCAC CATCGGCTCG
ATGTCGGAGC CCATGGTGTC GTATGACAAT GTCGGCTTCT TTCTGCTGTC GCAGGAAGTC
GCAAAGCATG TGAAGGTCGT ACAGAGCGGC CAGGGCGCCG ACGAGGTTTT TGCCGGCTAT
CACTGGTACC CGAAGCTCGC CAATTCAGAC GCGCCGGCAA GCGATTACGC AGCGGCCTTT
TTCGACCGCG ATTTCGACGA ATATCGCCGG ACGGTCCAGC CGCAATATCA CGACGGACAT
TTCGTCGAAG AATTCATCGA AGATCAGTTC TCCCGCCTCG GCGCAGAACA CGCCGTGGAC
AAGGCATTGC GCCTCGACAC CACCATCATG CTCGCCGACG ATCCGGTGAA GCGTGTGGAC
AACATGACGA TGGCTTGGGG ACTTGAGGCG CGCGTCCCCT TTCTCGATCA TGAACTTGTG
GAGCTTGCGG CGCGCATACC CGCTCAGCAC AAGCTTGCCG ATGGCGGCAA GGGCATTCTG
AAGACGGTCG CCCGCAAAGT TATTCCCGCC GACGTGATCG ACCGGCCGAA GGGCTACTTT
CCGGTTCCCG CGCTCAAATA TCTGGATGGG CCCTATCTCG CCATGGTGCG GGATGCGTTG
AGCACCGATG CGGCAAAGCA ACGGGGGCTC TTCAATCAGG GTTATCTCGA AGAACTGTTC
GCCAATCCAT CCGAACACAT CACACCGCTG CGCGGCTCCA AGCTCTGGCA GATCGGCCTT
CTGGAGCTGT GGCTGCAGTC GCATTCGGTC TGA
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| Protein sequence | MCGFSGEIRF DGVQADARAV MTMCDVLAPR GPDGSGLAAS GNVAMGHRRL KIIDLSERGS
QPMTDPALGL TLVFNGCIYN YRELREKLEA KGYSFHSASD TEVVLKAWHA WRADAPTHMN
GMFAFAVHER DSGRTALARD RLGIKPLYLS LSGKRLRFAS TLPAILAAGD VDTSIDPQAL
QAYMTWHAVV PPPLTMLKGI RKLPPATVAI FEADGSRRDT VYWSLGYERS REDAMRSEGD
WAEMLHASLI AAVDRRMIAD VPVGVLLSGG VDSSLIVGLL AEAGQQSLNT FSIGFEAANG
ELGDEFKYSD IVAKHFGTEH HKIFVPSSEL LDALPRTIGS MSEPMVSYDN VGFFLLSQEV
AKHVKVVQSG QGADEVFAGY HWYPKLANSD APASDYAAAF FDRDFDEYRR TVQPQYHDGH
FVEEFIEDQF SRLGAEHAVD KALRLDTTIM LADDPVKRVD NMTMAWGLEA RVPFLDHELV
ELAARIPAQH KLADGGKGIL KTVARKVIPA DVIDRPKGYF PVPALKYLDG PYLAMVRDAL
STDAAKQRGL FNQGYLEELF ANPSEHITPL RGSKLWQIGL LELWLQSHSV
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