| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0808 |
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| Symbol | |
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| ID | 5456336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 872696 |
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| End bp | 874840 |
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| Gene Length | 2145 bp |
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| Protein Length | 714 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640876377 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001412088 |
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| Protein GI | 154251264 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 0.131492 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAATA CCTTCTCGCT CCTTCGCGGG GCGGCGCTTG CGGCGCCGTT TCTCGCTTCC
CCCGCTTTCG CCCAAACGGC GGAAAGCGGC GCCGTCACCC TCCCGCAGAT CGTCATCACC
GCCGATGAAG CTAACGAAAA CCCTCTGTCG GGTCTCGACC CCGCCGTTCA TCCTTCCGGC
ACGCTCACCG TACCCGGCGT CATCGAGGCG CAGCGGGAGA TGTCGCGCAT GCCCGGTGCC
GTCAGCCTCG TCCCTGCCAC GCGCTATGAA GACAGCTACG CCCATAACAT CGAAGACGTG
ATGGACTTCA CGCCCGGCGT CTATGCGCGC AAGCGGTTCG GCGCGGAGGT TCGCCTCTCC
ATTCGCGGCT CCGGCCTCAG CCGCAGTTTC CATATGCGCG GCCTTGAAAT CATGCAGGAC
GGTATTCCGT TCAACCTCGC CGACGGCGCG GCGGACTTCC AGGAAATCGA TCCGCTGATC
GCGCAGCACA TCGAGGTCCA CAAGGGCGGC AACGGCCTGC GCTTCGGTTC GTCCACACTC
GGCGGCGCGA TCAACTTCGT CATGCCGTCC GGCCACACGG CCTCCGCCGA AAATCTCTTC
CGCATCGAAG GCGGCAGTCA CGGCACCGCG CGCGTCCATA TGCAGGCGGC GCGCGTCTAC
GGCGCCACCG ACGTTTTCGC CGCCATGACC GGCAATCTCG TCGAAGGTTT CCGCGACCAT
GAGCGCGAGG AGAGCATCCG TTTCTCCGGC AATATCGGCC ACCGCTTCAA TGAGCGCGCC
GAGACCCGCT TCTATCTCCT CTCCAACGTC GTCGATCAGG ATCTCCCGGG CACGCTGACA
CTGGCCCAGG CCGAGAACGA CCCCGAAATG GCCAATCCGC TGAGCGTCTC ACGCAATGAG
CAACGCAATG TCCGTTCGCT CCGCTTCGCC AACAAGACCG CGCTCGACCT CGACAATGGC
GGCACGCTCG AATTCGGCGG CTATGTCGGC TACAAGCGCC TGTACCACCC CATCTTCCGC
GTGCTCGATC AGCGCGGGCC GCTCGCCGGC GCCTTCACGC GCTACAGCGA CGAAGGCACG
CTTGCCGGGC ACCGCAACAT CGTCACGGTC GGCGGCGATG TTTCATGGGG CGAGGTCGAT
GCGAAGCAAT ACACAAACAA TGCCGGGTCG CGCGGCGCGT TGCAGGCGAG CGGCACGCAG
GAATCCACCA ATCTCCGCCT CTATCTCGAA AACCAGTTCT ATGTCGTGCC GACCGTCGCC
CTTGTCGGCG GTGCGCAGGC CATCCATTCG CGGCGCAAGT TCACCAACGA TCTTGTGCCC
GCCCAGAGCG ACAGCAGTTC CTACAGCACG GTGAGCCCGC GCGCCGGTGT GTTGTGGGAC
TTCGCGGAGA ACGCGCAGGC CTATACCAAT GTCACGCGCA GCTACGAGCC GCCGACCTTC
TCGGAACTCG TGCAGGCAAC CGTCTTCCAG TTCGTGCCGC TCGATCCGCA GCGCGCCTGG
ACGGCGGAAA TCGGCACGCG CGGCACGTCA GCCACCGCCG CATGGGACGT CGCGCTCTAC
CGGGCCGAGG TGAAAGGCGA ACTCATCTCC TTCACCGTGG TCCCCGGTAG TCCGCCCTTG
ACCCTCAATG CCGACGAGAC GATCCATCAG GGTATCGAAG CGTCGCTCAC GCTCGACATC
GGCGCCTATG GCGTGAACAA ACTGTTGCCG GAGGGGAGCC GCCTTCTGCT CGAACAGGCC
TATATGTTCA GCGACTTCAG CTTCGATGGC GATGCGGTCT ATGGCGACAA CAAGCTCGCC
GGCATGCCGC CCCATGTCTA TGTCGCCGCA CTGCGCTACA AGTCGCCGGC GCCGAACGGT
CTCGGCTGGG ACATCGCGCC GAAAGTCGAA TGGGTGCCGG ATGGCGGCTA TGTCGATTAC
GCAAACAATC TCGAAGCGCC GGGCTATGCG ACGCTCGGGC TTGAAGGCGG CGTCGACATC
GCCAAGGGCG TTCGCCTCTT TCTCGATGCG CGCAATCTGA CCGACGAGAA CTACATTTCC
ACCTACAGCA CCATCACCGA CGCGACAGAC CCGGCGGTCT CAACCAACGT CTTCTATCCG
GGCGAAGGCC GCAGCTTCTT TGCCGGTCTC AAACTCGCCT TCTAG
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| Protein sequence | MKNTFSLLRG AALAAPFLAS PAFAQTAESG AVTLPQIVIT ADEANENPLS GLDPAVHPSG
TLTVPGVIEA QREMSRMPGA VSLVPATRYE DSYAHNIEDV MDFTPGVYAR KRFGAEVRLS
IRGSGLSRSF HMRGLEIMQD GIPFNLADGA ADFQEIDPLI AQHIEVHKGG NGLRFGSSTL
GGAINFVMPS GHTASAENLF RIEGGSHGTA RVHMQAARVY GATDVFAAMT GNLVEGFRDH
EREESIRFSG NIGHRFNERA ETRFYLLSNV VDQDLPGTLT LAQAENDPEM ANPLSVSRNE
QRNVRSLRFA NKTALDLDNG GTLEFGGYVG YKRLYHPIFR VLDQRGPLAG AFTRYSDEGT
LAGHRNIVTV GGDVSWGEVD AKQYTNNAGS RGALQASGTQ ESTNLRLYLE NQFYVVPTVA
LVGGAQAIHS RRKFTNDLVP AQSDSSSYST VSPRAGVLWD FAENAQAYTN VTRSYEPPTF
SELVQATVFQ FVPLDPQRAW TAEIGTRGTS ATAAWDVALY RAEVKGELIS FTVVPGSPPL
TLNADETIHQ GIEASLTLDI GAYGVNKLLP EGSRLLLEQA YMFSDFSFDG DAVYGDNKLA
GMPPHVYVAA LRYKSPAPNG LGWDIAPKVE WVPDGGYVDY ANNLEAPGYA TLGLEGGVDI
AKGVRLFLDA RNLTDENYIS TYSTITDATD PAVSTNVFYP GEGRSFFAGL KLAF
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